WormBase Tree Display for Gene: WBGene00020128
expand all nodes | collapse all nodes | view schema
WBGene00020128 | SMap | S_parent | Sequence | CHROMOSOME_X | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | R193.2 | |||||
Molecular_name | R193.2 | ||||||
R193.2.1 | |||||||
CE48098 | |||||||
Other_name | CELE_R193.2 | Accession_evidence | NDB | BX284606 | |||
Public_name | R193.2 | ||||||
DB_info | Database | AceView | gene | XB752 | |||
WormQTL | gene | WBGene00020128 | |||||
WormFlux | gene | WBGene00020128 | |||||
NDB | locus_tag | CELE_R193.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00020128|UniProtKB=Q9N5F6 | |||||
family | PTHR22588 | ||||||
NCBI | gene | 182256 | |||||
RefSeq | protein | NM_075817.5 | |||||
TrEMBL | UniProtAcc | Q9N5F6 | |||||
UniProt_GCRP | UniProtAcc | Q9N5F6 | |||||
OMIM | gene | 120250 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Acquires_merge | WBGene00015475 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele (147) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00095396 | ||||||
Ortholog (26) | |||||||
Structured_description | Automated_description | Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Bethlem myopathy; Ullrich congenital muscular dystrophy; and dystonia 27. Is an ortholog of human COL6A3 (collagen type VI alpha 3 chain). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model (17) | ||||||
Molecular_info | Corresponding_CDS | R193.2 | |||||
Corresponding_CDS_history | R193.2:wp128 | ||||||
R193.2:wp171 | |||||||
R193.2:wp236 | |||||||
Corresponding_transcript | R193.2.1 | ||||||
Other_sequence | CBC03966_1 | ||||||
Associated_feature | WBsf653687 | ||||||
WBsf1003955 | |||||||
WBsf1003956 | |||||||
WBsf1003957 | |||||||
WBsf1003958 | |||||||
WBsf1022221 | |||||||
WBsf237006 | |||||||
Experimental_info | RNAi_result | WBRNAi00017897 | Inferred_automatically | RNAi_primary | |||
WBRNAi00052019 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00009082 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00039766 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010218 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00028507 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1023854 | ||||||
Expr1038754 | |||||||
Expr1155659 | |||||||
Expr2005674 | |||||||
Expr2023890 | |||||||
Drives_construct | WBCnstr00025356 | ||||||
Construct_product | WBCnstr00025356 | ||||||
Microarray_results (27) | |||||||
Expression_cluster (290) | |||||||
Interaction | WBInteraction000551540 | ||||||
Map_info | Positive | Positive_clone | R193 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | X | -18.485 | |||||
Reference (2) | |||||||
Method | Gene |