WormBase Tree Display for Gene: WBGene00020082
expand all nodes | collapse all nodes | view schema
WBGene00020082 | SMap | S_parent | Sequence | CHROMOSOME_X | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | gcp | |||||
Allele (109) | ||||||
Strain | WBStrain00031761 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation (12) | ||||||
Ortholog (46) | ||||||
Paralog | WBGene00007954 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00044121 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
Structured_description | Automated_description | Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in membrane. Is an ortholog of human FOLH1 (folate hydrolase 1); NAALAD2 (N-acetylated alpha-linked acidic dipeptidase 2); and NAALADL1 (N-acetylated alpha-linked acidic dipeptidase like 1). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:7693 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3788) | |
DOID:3526 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3788) | |||
Molecular_info | Corresponding_CDS | R57.1a | ||||
R57.1b | ||||||
R57.1c | ||||||
Corresponding_CDS_history | R57.1a:wp98 | |||||
R57.1a:wp129 | ||||||
R57.1b:wp98 | ||||||
R57.1b:wp129 | ||||||
Corresponding_transcript | R57.1a.1 | |||||
R57.1b.1 | ||||||
R57.1c.1 | ||||||
Other_sequence (51) | ||||||
Associated_feature | WBsf662403 | |||||
WBsf235252 | ||||||
WBsf235253 | ||||||
Experimental_info | RNAi_result | WBRNAi00052044 | Inferred_automatically | RNAi_primary | ||
WBRNAi00017915 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00034973 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1010413 | |||||
Expr1038722 | ||||||
Expr1155679 | ||||||
Expr2011970 | ||||||
Expr2030207 | ||||||
Drives_construct (2) | ||||||
Construct_product | WBCnstr00025382 | |||||
Microarray_results (31) | ||||||
Expression_cluster (169) | ||||||
Interaction (48) | ||||||
Map_info | Map | X | Position | -20.1873 | ||
Positive | Positive_clone | R57 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00038491 | |||||
WBPaper00049244 | ||||||
WBPaper00055090 | ||||||
WBPaper00066339 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |