WormBase Tree Display for Gene: WBGene00020062
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| WBGene00020062 | SMap | S_parent | Sequence | R13D11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-270 | Person_evidence | WBPerson600 | |||||
| Sequence_name | R13D11.8 | ||||||||
| Molecular_name | R13D11.8a | ||||||||
| R13D11.8a.1 | |||||||||
| CE39955 | |||||||||
| R13D11.8b | |||||||||
| Other_name | CELE_R13D11.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-270 | ||||||||
| DB_info | Database | AceView | gene | 5B274 | |||||
| WormQTL | gene | WBGene00020062 | |||||||
| WormFlux | gene | WBGene00020062 | |||||||
| NDB | locus_tag | CELE_R13D11.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020062|UniProtKB=O17013 | |||||||
| family | PTHR46587 | ||||||||
| NCBI | gene | 187867 | |||||||
| RefSeq | protein | NM_070927.7 | |||||||
| NR_132483.1 | |||||||||
| TrEMBL | UniProtAcc | O17013 | |||||||
| UniProt_GCRP | UniProtAcc | O17013 | |||||||
| RNAcentral | URSid | URS0000845B35 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-270 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (43) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029148 | ||||||||
| 00029149 | |||||||||
| 00029150 | |||||||||
| 00124778 | |||||||||
| 00124779 | |||||||||
| 00124780 | |||||||||
| 00124781 | |||||||||
| Ortholog (28) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R13D11.8a | |||||||
| Corresponding_CDS_history | R13D11.8:wp155 | ||||||||
| Corresponding_transcript | R13D11.8b | ||||||||
| R13D11.8a.1 | |||||||||
| Associated_feature | WBsf652457 | ||||||||
| WBsf718273 | |||||||||
| WBsf978920 | |||||||||
| WBsf999215 | |||||||||
| WBsf1019108 | |||||||||
| WBsf233295 | |||||||||
| Transcription_factor | WBTranscriptionFactor000632 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00017828 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00114477 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051907 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010366 | ||||||||
| Expr1038716 | |||||||||
| Expr1155559 | |||||||||
| Expr1200060 | |||||||||
| Expr2014160 | |||||||||
| Expr2032404 | |||||||||
| Drives_construct | WBCnstr00025392 | ||||||||
| Construct_product | WBCnstr00025392 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (90) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Map | V | Position | -19.95 | |||||
| Positive | Positive_clone | R13D11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5348 | |||||||
| 4700 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
