WormBase Tree Display for Gene: WBGene00019921
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| WBGene00019921 | SMap | S_parent | Sequence | R07C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxc-34 | Person_evidence | WBPerson655 | |||||
| Sequence_name | R07C3.5 | ||||||||
| Molecular_name | R07C3.5 | ||||||||
| R07C3.5.1 | |||||||||
| CE41923 | |||||||||
| Other_name | CELE_R07C3.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxc-34 | ||||||||
| DB_info | Database | AceView | gene | 2B217 | |||||
| WormQTL | gene | WBGene00019921 | |||||||
| WormFlux | gene | WBGene00019921 | |||||||
| NDB | locus_tag | CELE_R07C3.5 | |||||||
| NCBI | gene | 187667 | |||||||
| RefSeq | protein | NM_061454.5 | |||||||
| TREEFAM | TREEFAM_ID | TF353034 | |||||||
| TrEMBL | UniProtAcc | O16774 | |||||||
| UniProt_GCRP | UniProtAcc | O16774 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-34 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxc | ||||||||
| Allele (61) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrII_pilon.g3237 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (18) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalpapppa; MSpppaaa; RIM; head mesodermal cell; and pharynx based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and clk-1 based on microarray and RNA-seq studies. Is affected by nineteen chemicals including hydrogen sulfide; 1-methylnicotinamide; and methylmercuric chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07C3.5 | |||||||
| Corresponding_CDS_history | R07C3.5:wp185 | ||||||||
| Corresponding_transcript | R07C3.5.1 | ||||||||
| Associated_feature | WBsf643938 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00051457 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017539 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034698 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1038648 | ||||||||
| Expr1155144 | |||||||||
| Expr2011720 | |||||||||
| Expr2029959 | |||||||||
| Drives_construct | WBCnstr00025492 | ||||||||
| Construct_product | WBCnstr00025492 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction (210) | |||||||||
| Map_info | Map | II | Position | -15.5844 | |||||
| Positive | Positive_clone | R07C3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
