WormBase Tree Display for Gene: WBGene00019907
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WBGene00019907 | SMap | S_parent | Sequence | R05H11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | R05H11.1 | |||||||
Molecular_name | R05H11.1 | ||||||||
R05H11.1.1 | |||||||||
CE39169 | |||||||||
Other_name | CELE_R05H11.1 | Accession_evidence | NDB | BX284603 | |||||
Public_name | R05H11.1 | ||||||||
DB_info | Database | AceView | gene | 3H885 | |||||
WormQTL | gene | WBGene00019907 | |||||||
WormFlux | gene | WBGene00019907 | |||||||
NDB | locus_tag | CELE_R05H11.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00019907|UniProtKB=Q21761 | |||||||
family | PTHR21503 | ||||||||
NCBI | gene | 187631 | |||||||
RefSeq | protein | NM_066081.8 | |||||||
TREEFAM | TREEFAM_ID | TF316347 | |||||||
TrEMBL | UniProtAcc | Q21761 | |||||||
UniProt_GCRP | UniProtAcc | Q21761 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (34) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP3815 | ||||||||
Ortholog (16) | |||||||||
Paralog (57) | |||||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in coelomocyte; germ line; and intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including D-glucose; Alovudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R05H11.1 | |||||||
Corresponding_CDS_history | R05H11.1:wp88 | ||||||||
R05H11.1:wp149 | |||||||||
Corresponding_transcript | R05H11.1.1 | ||||||||
Other_sequence | CRC02388_1 | ||||||||
CRC05832_1 | |||||||||
CR07152 | |||||||||
Associated_feature | WBsf645285 | ||||||||
WBsf659104 | |||||||||
WBsf225152 | |||||||||
WBsf225153 | |||||||||
Experimental_info | RNAi_result | WBRNAi00017476 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00023285 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024083 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00023796 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00051340 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005872 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00051341 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00023550 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014521 | ||||||||
Expr1038640 | |||||||||
Expr1155034 | |||||||||
Expr2005416 | |||||||||
Expr2023637 | |||||||||
Drives_construct | WBCnstr00025504 | ||||||||
Construct_product | WBCnstr00025504 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (84) | |||||||||
Interaction | WBInteraction000314050 | ||||||||
WBInteraction000318573 | |||||||||
WBInteraction000452304 | |||||||||
Map_info | Positive | Positive_clone | R05H11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | -0.944825 | |||||||
Reference | WBPaper00012854 | ||||||||
Method | Gene |