WormBase Tree Display for Gene: WBGene00019881
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| WBGene00019881 | SMap | S_parent | Sequence | R05D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R05D3.8 | |||||||
| Molecular_name | R05D3.8 | ||||||||
| R05D3.8.1 | |||||||||
| CE42017 | |||||||||
| Other_name | CELE_R05D3.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | R05D3.8 | ||||||||
| DB_info | Database | AceView | gene | 3J446 | |||||
| WormQTL | gene | WBGene00019881 | |||||||
| WormFlux | gene | WBGene00019881 | |||||||
| NDB | locus_tag | CELE_R05D3.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019881|UniProtKB=P34541 | |||||||
| family | PTHR48026 | ||||||||
| NCBI | gene | 187602 | |||||||
| RefSeq | protein | NM_066442.7 | |||||||
| SwissProt | UniProtAcc | P34541 | |||||||
| UniProt_GCRP | UniProtAcc | P34541 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00042970 | ||||||||
| 00042971 | |||||||||
| 00042972 | |||||||||
| 00042973 | |||||||||
| 00124640 | |||||||||
| 00124641 | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00003423 | ||||||||
| WBGene00022235 | |||||||||
| WBGene00006807 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017135 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017140 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019510 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020354 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable mRNA 3'-UTR binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of catalytic step 2 spliceosome. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R05D3.8 | |||||||
| Corresponding_CDS_history | R05D3.8:wp151 | ||||||||
| R05D3.8:wp186 | |||||||||
| Corresponding_transcript | R05D3.8.1 | ||||||||
| Other_sequence | CSC02277_1 | ||||||||
| FD517712.1 | |||||||||
| CBC00859_1 | |||||||||
| Associated_feature | WBsf667150 | ||||||||
| WBsf667151 | |||||||||
| WBsf667152 | |||||||||
| WBsf993323 | |||||||||
| WBsf1015412 | |||||||||
| WBsf227126 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00062327 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034604 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017433 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005669 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00108521 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051290 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025861 | ||||||||
| Expr1038624 | |||||||||
| Expr1154984 | |||||||||
| Expr2005392 | |||||||||
| Expr2023613 | |||||||||
| Drives_construct | WBCnstr00025525 | ||||||||
| Construct_product | WBCnstr00025525 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (110) | |||||||||
| Interaction (26) | |||||||||
| Map_info | Positive | Positive_clone | R05D3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.297732 | |||||||
| Method | Gene |
