WormBase Tree Display for Gene: WBGene00019867
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WBGene00019867 | SMap | S_parent | Sequence | R04B3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | R04B3.2 | |||||||
Molecular_name | R04B3.2 | ||||||||
R04B3.2.1 | |||||||||
CE28745 | |||||||||
Other_name | CELE_R04B3.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | R04B3.2 | ||||||||
DB_info | Database (13) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (24) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (13) | |||||||||
Ortholog (39) | |||||||||
Paralog | WBGene00010480 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | The R04B3.2 gene encodes an ortholog of the human gene LYSOSOMAL GLYCOSYLASPARAGINASE (AGA; OMIM:208400), which when mutated leads to aspartylglucosaminuria (OMIM:208400). | Paper_evidence | WBPaper00004637 | |||||
Curator_confirmed | WBPerson1823 | ||||||||
WBPerson567 | |||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity; asparaginase activity; and beta-aspartyl-peptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. Human ortholog(s) of this gene implicated in aspartylglucosaminuria. Is an ortholog of human AGA (aspartylglucosaminidase). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0050461 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:318) | ||||
DOID:3211 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:318) | ||||||
Molecular_info | Corresponding_CDS | R04B3.2 | |||||||
Corresponding_transcript | R04B3.2.1 | ||||||||
Other_sequence (49) | |||||||||
Associated_feature | WBsf653751 | ||||||||
WBsf1004345 | |||||||||
WBsf237085 | |||||||||
Experimental_info | RNAi_result | WBRNAi00089130 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00093035 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017388 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034572 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00051219 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1023905 | ||||||||
Expr1038616 | |||||||||
Expr1154925 | |||||||||
Expr2005363 | |||||||||
Expr2023583 | |||||||||
Drives_construct | WBCnstr00025534 | ||||||||
Construct_product | WBCnstr00025534 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (138) | |||||||||
Interaction (28) | |||||||||
Map_info | Positive | Positive_clone | R04B3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | -15.1615 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |