WormBase Tree Display for Gene: WBGene00019704

WBGene00019704 SMap: S_parent: Sequence: M01D1
  Identity: Version: 2
    Name: CGC_name: fbxb-40 Person_evidence: WBPerson655
      Sequence_name: M01D1.9
      Molecular_name: M01D1.9
        M01D1.9.1
        CE12258
      Other_name: CELE_M01D1.9 Accession_evidence: NDB BX284602
      Public_name: fbxb-40
    DB_info: Database: AceView gene 2B340
        WormQTL gene WBGene00019704
        WormFlux gene WBGene00019704
        NDB locus_tag CELE_M01D1.9
        Panther gene CAEEL|WormBase=WBGene00019704|UniProtKB=O17231
          family PTHR22899
        NCBI gene 173487
        RefSeq protein NM_061498.6
        TREEFAM TREEFAM_ID TF319367
        TrEMBL UniProtAcc O17231
        UniProt_GCRP UniProtAcc O17231
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-40
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (123)
    RNASeq_FPKM (74)
    Ortholog (28)
    Paralog (143)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABalpppapa; ABplaapaaa; NSM; amphid neurons; and cephalic sheath cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; lin-4; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including multi-walled carbon nanotube; bisphenol S; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: M01D1.9
    Corresponding_transcript: M01D1.9.1
    Associated_feature: WBsf649844
      WBsf649845
      WBsf665203
      WBsf986552
      WBsf1011470
      WBsf222659
  Experimental_info: RNAi_result: WBRNAi00034347 Inferred_automatically: RNAi_primary
      WBRNAi00050742 Inferred_automatically: RNAi_primary
      WBRNAi00017097 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014071
      Expr1038513
      Expr1154439
      Expr2011641
      Expr2029880
    Drives_construct: WBCnstr00025658
    Construct_product: WBCnstr00025658
    Microarray_results (14)
    Expression_cluster (127)
    Interaction: WBInteraction000238940
      WBInteraction000265328
      WBInteraction000273186
      WBInteraction000310527
      WBInteraction000314568
      WBInteraction000330206
      WBInteraction000342441
      WBInteraction000426343
      WBInteraction000454683
  Map_info: Map: II Position: -15.5709
    Positive: Positive_clone: M01D1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene