WormBase Tree Display for Gene: WBGene00019495
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WBGene00019495 | SMap | S_parent | Sequence | K07E8 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | sdz | ||||||
Allele (82) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | chrII_pilon.g3156 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Enriched in head mesodermal cell; intestine; neurons; rectal epithelial cell; and rectum based on tiling array; proteomic; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-four chemicals including Ethanol; 4-bromodiphenyl ether; and Alovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Nucleic acid-binding, OB-fold. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | K07E8.3 | |||||
Corresponding_transcript | K07E8.3.1 | ||||||
K07E8.3.2 | |||||||
Associated_feature | WBsf220781 | ||||||
WBsf220782 | |||||||
WBsf220783 | |||||||
Experimental_info | RNAi_result (15) | ||||||
Expr_pattern | Expr16269 | ||||||
Expr1016296 | |||||||
Expr1153870 | |||||||
Expr2015682 | |||||||
Expr2033915 | |||||||
Drives_construct | WBCnstr00025797 | ||||||
WBCnstr00042870 | |||||||
Construct_product (2) | |||||||
Microarray_results (20) | |||||||
Expression_cluster (321) | |||||||
Interaction (116) | |||||||
Map_info | Map | II | Position | -15.5928 | Error | 0.000122 | |
Positive | Positive_clone | K07E8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00050770 | ||||||
WBPaper00065331 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |