WormBase Tree Display for Gene: WBGene00019466
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WBGene00019466 | SMap | S_parent | Sequence | K07B1 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | tos-1 | Person_evidence | WBPerson2495 | |||
WBPerson268 | |||||||
Sequence_name | K07B1.6 | ||||||
Molecular_name | K07B1.6a | ||||||
K07B1.6a.1 | |||||||
CE11886 | |||||||
K07B1.6b | |||||||
CE47270 | |||||||
K07B1.6b.1 | |||||||
K07B1.6b.2 | |||||||
K07B1.6c | |||||||
K07B1.6d | |||||||
K07B1.6e | |||||||
Other_name | CELE_K07B1.6 | Accession_evidence | NDB | BX284605 | |||
Public_name | tos-1 | ||||||
DB_info | Database | AceView | gene | 5J820 | |||
WormQTL | gene | WBGene00019466 | |||||
WormFlux | gene | WBGene00019466 | |||||
NDB | locus_tag | CELE_K07B1.6 | |||||
NCBI | gene | 3565833 | |||||
RefSeq | protein | NR_133619.1 | |||||
NR_133618.1 | |||||||
NM_001392573.1 | |||||||
NM_001380724.3 | |||||||
NR_133617.1 | |||||||
TREEFAM | TREEFAM_ID | TF320143 | |||||
TrEMBL | UniProtAcc | H2KZK5 | |||||
Q95R01 | |||||||
UniProt_GCRP | UniProtAcc | H2KZK5 | |||||
RNAcentral | URSid | URS00008D2FEB | |||||
URS00008D5AF4 | |||||||
URS00008DCAC8 | |||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tos | ||||||
Allele (74) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (18) | |||||||
Paralog | WBGene00045406 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Structured_description | Automated_description | Enriched in several structures, including ABarpapaapp; ABplaaaaapp; germ line; intestine; and neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; rde-1; and sir-2.1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including aldicarb; rotenone; and Rifampin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | K07B1.6a | |||||
K07B1.6b | |||||||
Corresponding_CDS_history | K07B1.6b:wp197 | ||||||
K07B1.6b:wp230 | |||||||
K07B1.6c:wp250 | |||||||
K07B1.6d:wp250 | |||||||
Corresponding_transcript | K07B1.6c | ||||||
K07B1.6d | |||||||
K07B1.6e | |||||||
K07B1.6a.1 | |||||||
K07B1.6b.1 | |||||||
K07B1.6b.2 | |||||||
Other_sequence (19) | |||||||
Associated_feature | WBsf652903 | ||||||
WBsf652904 | |||||||
WBsf652905 | |||||||
WBsf668668 | |||||||
WBsf669222 | |||||||
WBsf1000871 | |||||||
WBsf1000872 | |||||||
WBsf234221 | |||||||
WBsf234222 | |||||||
Experimental_info | RNAi_result | WBRNAi00001245 | Inferred_automatically | RNAi_primary | |||
WBRNAi00050117 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00016697 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00050114 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00034047 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00050115 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027404 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1011398 | ||||||
Expr1038410 | |||||||
Expr1153816 | |||||||
Expr2017462 | |||||||
Expr2035601 | |||||||
Microarray_results (51) | |||||||
Expression_cluster (202) | |||||||
Interaction | WBInteraction000327805 | ||||||
WBInteraction000438626 | |||||||
WBInteraction000455485 | |||||||
WBInteraction000544304 | |||||||
Map_info (3) | |||||||
Reference | WBPaper00039705 | ||||||
WBPaper00040388 | |||||||
WBPaper00041328 | |||||||
WBPaper00043872 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |