WormBase Tree Display for Gene: WBGene00019418
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| WBGene00019418 | SMap | S_parent | Sequence | K05F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxb-54 | Person_evidence | WBPerson655 | |||||
| Sequence_name | K05F6.7 | ||||||||
| Molecular_name | K05F6.7 | ||||||||
| K05F6.7.1 | |||||||||
| CE28588 | |||||||||
| Other_name | CELE_K05F6.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxb-54 | ||||||||
| DB_info | Database | AceView | gene | 2B846 | |||||
| WormQTL | gene | WBGene00019418 | |||||||
| WormFlux | gene | WBGene00019418 | |||||||
| NDB | locus_tag | CELE_K05F6.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019418|UniProtKB=O44865 | |||||||
| family | PTHR22899 | ||||||||
| NCBI | gene | 173529 | |||||||
| RefSeq | protein | NM_061594.3 | |||||||
| TREEFAM | TREEFAM_ID | TF319367 | |||||||
| TrEMBL | UniProtAcc | O44865 | |||||||
| UniProt_GCRP | UniProtAcc | O44865 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:22:20 | WBPerson2970 | Name_change | CGC_name | fbxb-54 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxb | ||||||||
| Allele (63) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Paralog (143) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaaaala; ABalaaaarl; ABalaaaarr; ABalaapaaa; and ciliated neurons based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty chemicals including hydrogen sulfide; rotenone; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K05F6.7 | |||||||
| Corresponding_transcript | K05F6.7.1 | ||||||||
| Associated_feature | WBsf649863 | ||||||||
| WBsf1011582 | |||||||||
| WBsf222698 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016642 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00081687 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000566 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050006 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020587 | ||||||||
| Expr1038389 | |||||||||
| Expr1153701 | |||||||||
| Expr2011655 | |||||||||
| Expr2029894 | |||||||||
| Drives_construct | WBCnstr00022348 | ||||||||
| WBCnstr00025853 | |||||||||
| Construct_product | WBCnstr00022348 | ||||||||
| WBCnstr00025853 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (143) | |||||||||
| Interaction (203) | |||||||||
| Map_info | Map | II | Position | -15.3854 | Error | 0.001292 | |||
| Positive | Positive_clone | K05F6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
