WormBase Tree Display for Gene: WBGene00019294
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| WBGene00019294 | SMap | S_parent | Sequence | K02A6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | K02A6.3 | |||||||
| Molecular_name | K02A6.3 | ||||||||
| K02A6.3.1 | |||||||||
| CE28577 | |||||||||
| Other_name | CELE_K02A6.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | K02A6.3 | ||||||||
| DB_info | Database | AceView | gene | XI848 | |||||
| WormQTL | gene | WBGene00019294 | |||||||
| WormFlux | gene | WBGene00019294 | |||||||
| NDB | locus_tag | CELE_K02A6.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019294|UniProtKB=Q21112 | |||||||
| family | PTHR20872 | ||||||||
| NCBI | gene | 181077 | |||||||
| RefSeq | protein | NM_001029574.4 | |||||||
| TrEMBL | UniProtAcc | Q21112 | |||||||
| UniProt_GCRP | UniProtAcc | Q21112 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (69) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including dopaminergic neurons; head mesodermal cell; intestinal muscle; mechanosensory neurons; and rectal muscle based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including Ethanol; levamisole; and Alovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; F-box-like; F-box-like domain superfamily; and Leucine-rich repeat domain superfamily. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K02A6.3 | |||||||
| Corresponding_CDS_history | K02A6.3b:wp128 | ||||||||
| K02A6.3b:wp275 | |||||||||
| Corresponding_transcript | K02A6.3.1 | ||||||||
| Other_sequence | CJC08233_1 | ||||||||
| CBC07906_1 | |||||||||
| Associated_feature | WBsf654197 | ||||||||
| WBsf654198 | |||||||||
| WBsf654199 | |||||||||
| WBsf654200 | |||||||||
| WBsf982209 | |||||||||
| WBsf237659 | |||||||||
| WBsf237660 | |||||||||
| WBsf237661 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00049658 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016428 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00084264 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033845 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010908 | ||||||||
| Expr1038337 | |||||||||
| Expr1153384 | |||||||||
| Expr2004665 | |||||||||
| Expr2022892 | |||||||||
| Drives_construct | WBCnstr00025939 | ||||||||
| Construct_product | WBCnstr00025939 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (127) | |||||||||
| Interaction | WBInteraction000216805 | ||||||||
| WBInteraction000262900 | |||||||||
| WBInteraction000462499 | |||||||||
| Map_info | Positive | Positive_clone | K02A6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -0.306581 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
