WormBase Tree Display for Gene: WBGene00019115
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| WBGene00019115 | SMap | S_parent | Sequence | F59E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-195 | Person_evidence | WBPerson600 | |||||
| Sequence_name | F59E11.10 | ||||||||
| Molecular_name (11) | |||||||||
| Other_name | CELE_F59E11.10 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-195 | ||||||||
| DB_info | Database | AceView | gene | 5J448 | |||||
| WormQTL | gene | WBGene00019115 | |||||||
| WormFlux | gene | WBGene00019115 | |||||||
| NDB | locus_tag | CELE_F59E11.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019115|UniProtKB=H2L098 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 186625 | |||||||
| RefSeq | protein | NM_001269182.3 | |||||||
| NM_001383363.1 | |||||||||
| TrEMBL | UniProtAcc | H2L098 | |||||||
| O16752 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L098 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-195 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (84) | |||||||||
| Strain | WBStrain00051087 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022935 | ||||||||
| 00022936 | |||||||||
| 00022937 | |||||||||
| 00124041 | |||||||||
| 00124042 | |||||||||
| 00124043 | |||||||||
| 00124044 | |||||||||
| Contained_in_operon | CEOP5216 | ||||||||
| Ortholog (24) | |||||||||
| Paralog (217) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F59E11.10a | |||||||
| F59E11.10b | |||||||||
| Corresponding_CDS_history | F59E11.10:wp197 | ||||||||
| F59E11.10:wp218 | |||||||||
| Corresponding_transcript | F59E11.10a.1 | ||||||||
| F59E11.10a.2 | |||||||||
| F59E11.10a.3 | |||||||||
| F59E11.10a.4 | |||||||||
| F59E11.10a.5 | |||||||||
| F59E11.10a.6 | |||||||||
| F59E11.10b.1 | |||||||||
| Associated_feature | WBsf978495 | ||||||||
| WBsf234163 | |||||||||
| Transcription_factor | WBTranscriptionFactor000503 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00016110 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049188 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017166 | ||||||||
| Expr1152933 | |||||||||
| Expr2014097 | |||||||||
| Expr2032336 | |||||||||
| Construct_product | WBCnstr00016845 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (99) | |||||||||
| Interaction | WBInteraction000336628 | ||||||||
| WBInteraction000369108 | |||||||||
| WBInteraction000436308 | |||||||||
| WBInteraction000528004 | |||||||||
| Map_info | Map | V | Position | 1.89147 | Error | 0.000994 | |||
| Positive | Positive_clone | F59E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
