WormBase Tree Display for Gene: WBGene00019045
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| WBGene00019045 | SMap | S_parent | Sequence | F58E1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxb-47 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F58E1.14 | ||||||||
| Molecular_name | F58E1.14 | ||||||||
| F58E1.14.1 | |||||||||
| CE11398 | |||||||||
| Other_name | CELE_F58E1.14 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxb-47 | ||||||||
| DB_info | Database | AceView | gene | 2B992 | |||||
| WormQTL | gene | WBGene00019045 | |||||||
| WormFlux | gene | WBGene00019045 | |||||||
| NDB | locus_tag | CELE_F58E1.14 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019045|UniProtKB=Q9TZF7 | |||||||
| family | PTHR22899 | ||||||||
| NCBI | gene | 186518 | |||||||
| RefSeq | protein | NM_061647.4 | |||||||
| TREEFAM | TREEFAM_ID | TF319367 | |||||||
| TrEMBL | UniProtAcc | Q9TZF7 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TZF7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:22:20 | WBPerson2970 | Name_change | CGC_name | fbxb-47 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxb | ||||||||
| Allele (42) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog (143) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in ADEshL; ADEshR; NSM; and germ line based on RNA-seq; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and alg-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eighteen chemicals including methylmercuric chloride; Alovudine; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F58E1.14 | |||||||
| Corresponding_transcript | F58E1.14.1 | ||||||||
| Associated_feature | WBsf649882 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00015961 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033092 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048983 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014085 | ||||||||
| Expr1038226 | |||||||||
| Expr1152724 | |||||||||
| Expr2011648 | |||||||||
| Expr2029887 | |||||||||
| Drives_construct | WBCnstr00026102 | ||||||||
| Construct_product | WBCnstr00026102 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction (248) | |||||||||
| Map_info | Map | II | Position | -14.5409 | Error | 0.002826 | |||
| Positive | Positive_clone | F58E1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012854 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
