WormBase Tree Display for Gene: WBGene00019025
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| WBGene00019025 | SMap | S_parent | Sequence | F58A6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srb-16 | Person_evidence | WBPerson522 | |||||
| WBPerson3024 | |||||||||
| Sequence_name | F58A6.6 | ||||||||
| Molecular_name | F58A6.6 | ||||||||
| F58A6.6.1 | |||||||||
| CE04679 | |||||||||
| Other_name | CELE_F58A6.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | srb-16 | ||||||||
| DB_info | Database | AceView | gene | 2F440 | |||||
| WormQTL | gene | WBGene00019025 | |||||||
| WormFlux | gene | WBGene00019025 | |||||||
| NDB | locus_tag | CELE_F58A6.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019025|UniProtKB=Q20961 | |||||||
| family | PTHR31216 | ||||||||
| NCBI | gene | 186489 | |||||||
| RefSeq | protein | NM_062555.4 | |||||||
| SwissProt | UniProtAcc | Q20961 | |||||||
| TREEFAM | TREEFAM_ID | TF315769 | |||||||
| UniProt_GCRP | UniProtAcc | Q20961 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Jan 2005 10:41:52 | WBPerson2970 | Name_change | CGC_name | srb-16 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srb | ||||||||
| Allele (26) | |||||||||
| Strain | WBStrain00003234 | ||||||||
| WBStrain00037962 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (20) | |||||||||
| Paralog (42) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and sensory perception of chemical stimulus. Predicted to be located in dendrite; perikaryon; and plasma membrane. Expressed in neurons; pharyngeal muscle cell; tail; and in male. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F58A6.6 | |||||||
| Corresponding_transcript | F58A6.6.1 | ||||||||
| Other_sequence | CBC05251_1 | ||||||||
| Associated_feature | WBsf650044 | ||||||||
| WBsf223003 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015939 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033069 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048944 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6247 | ||||||||
| Expr14024 | |||||||||
| Expr14493 | |||||||||
| Expr14494 | |||||||||
| Expr1027264 | |||||||||
| Expr1152681 | |||||||||
| Expr2016179 | |||||||||
| Expr2034409 | |||||||||
| Drives_construct | WBCnstr00003709 | ||||||||
| WBCnstr00026116 | |||||||||
| WBCnstr00041061 | |||||||||
| Construct_product | WBCnstr00026116 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (77) | |||||||||
| Interaction | WBInteraction000141095 | ||||||||
| WBInteraction000400519 | |||||||||
| WBInteraction000453782 | |||||||||
| Map_info | Map | II | Position | -1.99824 | Error | 0.005293 | |||
| Positive | Positive_clone | F58A6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00048063 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
