WormBase Tree Display for Gene: WBGene00018933
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| WBGene00018933 | SMap | S_parent | Sequence | F56B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F56B3.9 | |||||||
| Molecular_name | F56B3.9 | ||||||||
| F56B3.9.1 | |||||||||
| CE52066 | |||||||||
| Other_name | CELE_F56B3.9 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F56B3.9 | ||||||||
| DB_info | Database | AceView | gene | 4B525 | |||||
| WormQTL | gene | WBGene00018933 | |||||||
| WormFlux | gene | WBGene00018933 | |||||||
| NDB | locus_tag | CELE_F56B3.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018933|UniProtKB=O45111 | |||||||
| family | PTHR33936 | ||||||||
| NCBI | gene | 186358 | |||||||
| RefSeq | protein | NM_001356904.1 | |||||||
| TrEMBL | UniProtAcc | O45111 | |||||||
| UniProt_GCRP | UniProtAcc | O45111 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (25) | |||||||||
| Strain | WBStrain00031918 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | CSP32.g13011 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | |||||
| GCK72_022088 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| chrIV_pilon.g9565 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00177873 | Caenorhabditis japonica | From_analysis | WormBase-Compara | ||||||
| WBGene00082919 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00011626 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00020942 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00050929 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in NSM based on tiling array studies. Is affected by several genes including eat-2; sir-2.1; and mex-3 based on microarray and RNA-seq studies. Is affected by multi-walled carbon nanotube; metformin; and Sirolimus based on RNA-seq studies. Is predicted to encode a protein with the following domain: Zinc finger C2H2-type. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56B3.9 | |||||||
| Corresponding_CDS_history | F56B3.9:wp102 | ||||||||
| F56B3.9:wp261 | |||||||||
| Corresponding_transcript | F56B3.9.1 | ||||||||
| Associated_feature | WBsf995271 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00015951 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048643 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048642 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032931 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018470 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015780 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015783 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016129 | ||||||||
| Expr1152406 | |||||||||
| Expr2022497 | |||||||||
| Drives_construct | WBCnstr00026185 | ||||||||
| Construct_product | WBCnstr00026185 | ||||||||
| Microarray_results (32) | |||||||||
| Expression_cluster (36) | |||||||||
| Interaction | WBInteraction000331339 | ||||||||
| Map_info | Positive | Positive_clone | F56B3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -23.5124 | |||||||
| Method | Gene |
