WormBase Tree Display for Gene: WBGene00018923
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| WBGene00018923 | SMap | S_parent | Sequence | F56A6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | eme-1 | Paper_evidence | WBPaper00043947 | |||||
| Person_evidence | WBPerson113 | ||||||||
| Sequence_name | F56A6.4 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | Y65B4A.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F56A6.4 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | eme-1 | ||||||||
| DB_info | Database | AceView | gene | 1B88 | |||||
| WormQTL | gene | WBGene00018923 | |||||||
| WormFlux | gene | WBGene00018923 | |||||||
| NDB | locus_tag | CELE_F56A6.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018923|UniProtKB=Q9GZG5 | |||||||
| family | PTHR13451 | ||||||||
| NCBI | gene | 171652 | |||||||
| RefSeq | protein | NM_001306281.3 | |||||||
| NM_001306280.3 | |||||||||
| NM_001306282.3 | |||||||||
| NM_058356.4 | |||||||||
| TrEMBL | UniProtAcc | V6CJ54 | |||||||
| Q9GZG5 | |||||||||
| V6CLM3 | |||||||||
| V6CLH9 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9GZG5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Aug 2013 14:18:14 | WBPerson2970 | Name_change | CGC_name | eme-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | eme | ||||||||
| Allele (298) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00093092 | ||||||||
| 00093093 | |||||||||
| 00093094 | |||||||||
| 00093095 | |||||||||
| 00093096 | |||||||||
| 00093097 | |||||||||
| 00093098 | |||||||||
| 00105293 | |||||||||
| 00105294 | |||||||||
| Contained_in_operon | CEOP1012 | ||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00016602 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Enables enzyme binding activity. Predicted to be involved in double-strand break repair via break-induced replication; mitotic intra-S DNA damage checkpoint signaling; and resolution of meiotic recombination intermediates. Predicted to be located in nucleus. Predicted to be part of Holliday junction resolvase complex. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56A6.4a | |||||||
| F56A6.4b | |||||||||
| F56A6.4c | |||||||||
| F56A6.4d | |||||||||
| Corresponding_CDS_history | F56A6.4:wp102 | ||||||||
| F56A6.4:wp224 | |||||||||
| Corresponding_transcript | F56A6.4a.1 | ||||||||
| F56A6.4b.1 | |||||||||
| F56A6.4c.1 | |||||||||
| F56A6.4d.1 | |||||||||
| Other_sequence | HGC00662_1 | ||||||||
| HG10716 | |||||||||
| CRC00154_1 | |||||||||
| CR05194 | |||||||||
| Associated_feature | WBsf663877 | ||||||||
| WBsf982547 | |||||||||
| WBsf982548 | |||||||||
| WBsf982549 | |||||||||
| WBsf1009107 | |||||||||
| WBsf218921 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00070748 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004755 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057899 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070746 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061632 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048617 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070747 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00095808 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004758 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026286 | ||||||||
| Expr1038164 | |||||||||
| Expr1152385 | |||||||||
| Expr2011310 | |||||||||
| Expr2029546 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (109) | |||||||||
| Interaction | WBInteraction000007980 | ||||||||
| WBInteraction000007981 | |||||||||
| WBInteraction000540716 | |||||||||
| WBInteraction000548300 | |||||||||
| Map_info | Map | I | Position | -18.7568 | |||||
| Positive | Positive_clone | F56A6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
