WormBase Tree Display for Gene: WBGene00018828
expand all nodes | collapse all nodes | view schema
| WBGene00018828 | SMap | S_parent | Sequence | F54E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sdz-21 | Paper_evidence | WBPaper00024645 | |||||
| Person_evidence | WBPerson374 | ||||||||
| Sequence_name | F54E7.5 | ||||||||
| Molecular_name | F54E7.5 | ||||||||
| F54E7.5.1 | |||||||||
| CE01316 | |||||||||
| Other_name | CELE_F54E7.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | sdz-21 | ||||||||
| DB_info | Database | AceView | gene | 3G744 | |||||
| WormQTL | gene | WBGene00018828 | |||||||
| WormFlux | gene | WBGene00018828 | |||||||
| NDB | locus_tag | CELE_F54E7.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018828|UniProtKB=Q20783 | |||||||
| family | PTHR38626 | ||||||||
| NCBI | gene | 186248 | |||||||
| RefSeq | protein | NM_065814.5 | |||||||
| TREEFAM | TREEFAM_ID | TF316624 | |||||||
| TrEMBL | UniProtAcc | Q20783 | |||||||
| UniProt_GCRP | UniProtAcc | Q20783 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 19 Aug 2005 17:08:06 | WBPerson2970 | Name_change | CGC_name | sdz-21 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sdz | ||||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00069122 | ||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00007321 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00008080 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011221 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54E7.5 | |||||||
| Corresponding_transcript | F54E7.5.1 | ||||||||
| Associated_feature | WBsf651065 | ||||||||
| WBsf666916 | |||||||||
| WBsf992479 | |||||||||
| WBsf226710 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048351 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032806 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005218 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015640 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028638 | ||||||||
| Expr1038121 | |||||||||
| Expr1152147 | |||||||||
| Expr2015680 | |||||||||
| Expr2033913 | |||||||||
| Drives_construct | WBCnstr00026260 | ||||||||
| Construct_product | WBCnstr00026260 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction (47) | |||||||||
| Map_info | Map | III | Position | -1.46286 | Error | 0.000899 | |||
| Positive | Positive_clone | F54E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038341 | ||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
