WormBase Tree Display for Gene: WBGene00018814
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WBGene00018814 | SMap | S_parent | Sequence | F54D11 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (25) | ||||||
RNASeq_FPKM (74) | ||||||
Contained_in_operon | CEOP5563 | |||||
Ortholog | WBGene00030510 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||
WBGene00030509 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||
OrthoMCL | ||||||
OMA | ||||||
WBGene00058029 | Caenorhabditis remanei | From_analysis | OMA | |||
WBGene00152013 | Caenorhabditis brenneri | From_analysis | OMA | |||
WBGene00178463 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||
WBGene00219539 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | |||
Csp5_scaffold_02224.g25506 | Caenorhabditis sinica | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Enriched in germ line and germline precursor cell based on RNA-seq studies. Is affected by several genes including skn-1; pgl-1; and lin-39 based on RNA-seq; microarray; and proteomic studies. Is affected by four chemicals including Zidovudine; paraquat; and Chlorpyrifos based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F54D11.4 | ||||
Corresponding_CDS_history | F54D11.4:wp230 | |||||
F54D11.4a:wp231 | ||||||
F54D11.4a:wp271 | ||||||
Corresponding_transcript | F54D11.4.1 | |||||
Other_sequence | CR07293 | |||||
CBC01414_1 | ||||||
CRC09294_1 | ||||||
CR09862 | ||||||
CRC05914_1 | ||||||
Associated_feature | WBsf646764 | |||||
WBsf999835 | ||||||
WBsf999836 | ||||||
WBsf999837 | ||||||
WBsf1019523 | ||||||
WBsf1019524 | ||||||
WBsf231675 | ||||||
Experimental_info | RNAi_result | WBRNAi00048297 | Inferred_automatically | RNAi_primary | ||
Expr_pattern | Expr1016608 | |||||
Expr1038115 | ||||||
Expr1152097 | ||||||
Expr2004140 | ||||||
Expr2022364 | ||||||
Microarray_results (13) | ||||||
Expression_cluster (62) | ||||||
Interaction | WBInteraction000218287 | |||||
WBInteraction000559806 | ||||||
WBInteraction000560107 | ||||||
WBInteraction000564851 | ||||||
WBInteraction000565448 | ||||||
WBInteraction000569040 | ||||||
WBInteraction000579076 | ||||||
Map_info | Positive | Positive_clone | F54D11 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | V | -4.9323 | ||||
Reference | WBPaper00027108 | |||||
WBPaper00027634 | ||||||
Remark | [140610 pad] Gene history inconsistency in this object. Some of the history has been edited. | Curator_confirmed | WBPerson1983 | |||
Method | Gene |