WormBase Tree Display for Gene: WBGene00018805
expand all nodes | collapse all nodes | view schema
| WBGene00018805 | SMap | S_parent | Sequence | F54D10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F54D10.4 | |||||||
| Molecular_name | F54D10.4 | ||||||||
| F54D10.4.1 | |||||||||
| CE35977 | |||||||||
| Other_name | CELE_F54D10.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F54D10.4 | ||||||||
| DB_info | Database | AceView | gene | 2E94 | |||||
| WormQTL | gene | WBGene00018805 | |||||||
| WormFlux | gene | WBGene00018805 | |||||||
| NDB | locus_tag | CELE_F54D10.4 | |||||||
| NCBI | gene | 186233 | |||||||
| RefSeq | protein | NM_062255.3 | |||||||
| TrEMBL | UniProtAcc | Q9TZ89 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TZ89 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (44) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP2110 | ||||||||
| Ortholog | chrII_pilon.g4115 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in AFD and germ line based on RNA-seq studies. Is affected by several genes including clk-1; pgl-1; and dcr-1 based on microarray and RNA-seq studies. Is affected by eight chemicals including rotenone; stavudine; and Rifampin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54D10.4 | |||||||
| Corresponding_CDS_history | F54D10.4:wp112 | ||||||||
| Corresponding_transcript | F54D10.4.1 | ||||||||
| Associated_feature | WBsf1011970 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00015601 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103385 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048288 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032776 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028635 | ||||||||
| Expr1152089 | |||||||||
| Expr2004134 | |||||||||
| Expr2022358 | |||||||||
| Drives_construct | WBCnstr00026269 | ||||||||
| Construct_product | WBCnstr00026269 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (66) | |||||||||
| Interaction | WBInteraction000135147 | ||||||||
| WBInteraction000277381 | |||||||||
| WBInteraction000301582 | |||||||||
| WBInteraction000309715 | |||||||||
| WBInteraction000333022 | |||||||||
| WBInteraction000382908 | |||||||||
| WBInteraction000387539 | |||||||||
| WBInteraction000404795 | |||||||||
| WBInteraction000429712 | |||||||||
| WBInteraction000454693 | |||||||||
| Map_info | Positive | Positive_clone | F54D10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -6.21035 | |||||||
| Method | Gene |
