WormBase Tree Display for Gene: WBGene00018691
expand all nodes | collapse all nodes | view schema
| WBGene00018691 | SMap | S_parent | Sequence | F52D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-17 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F52D2.10 | ||||||||
| Molecular_name | F52D2.10 | ||||||||
| Other_name | CELE_F52D2.10 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | fbxa-17 | ||||||||
| DB_info | Database | AceView | gene | XC573 | |||||
| WormQTL | gene | WBGene00018691 | |||||||
| WormFlux | gene | WBGene00018691 | |||||||
| NDB | locus_tag | CELE_F52D2.10 | |||||||
| NCBI | gene | 186107 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-17 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0000336 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00138854 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||
| WBGene00152433 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00141428 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00146273 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00088344 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||||
| WBGene00122765 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| Paralog (218) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Is affected by spn-4 based on RNA-seq studies. Is affected by Sirolimus based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS_history | F52D2.10:wp270 | |||||||
| Corresponding_pseudogene | F52D2.10 | ||||||||
| Associated_feature | WBsf1022387 | ||||||||
| Experimental_info | Expr_pattern | Expr1020729 | |||||||
| Expr1151787 | |||||||||
| Drives_construct | WBCnstr00026338 | ||||||||
| Construct_product | WBCnstr00026338 | ||||||||
| Microarray_results | 185461_at | ||||||||
| GPL19516_CGZ0023109 | |||||||||
| GPL21109_F52D2.10 | |||||||||
| GPL8673_F52D2_10P00338 | |||||||||
| GPL9450_F52D2.10 | |||||||||
| cea2.d.27623 | |||||||||
| Expression_cluster | WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray | ||||||||
| WBPaper00058598:spn-4(tm291)_downregulated | |||||||||
| WBPaper00061527:srj-21-srh-32 | |||||||||
| WBPaper00030985:Serratia_marcesens_downregulated | |||||||||
| WBPaper00048989:N2_rapamycin_upregulated | |||||||||
| Map_info | Map | X | Position | -17.1392 | Error | 0.017743 | |||
| Positive | Positive_clone | F52D2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012854 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
