WormBase Tree Display for Gene: WBGene00018680
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WBGene00018680 | SMap | S_parent | Sequence | F52C12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | tsen-54 | Person_evidence | WBPerson236 | |||
Sequence_name | F52C12.3 | ||||||
Molecular_name | F52C12.3 | ||||||
F52C12.3.1 | |||||||
CE19436 | |||||||
Other_name | CELE_F52C12.3 | Accession_evidence | NDB | BX284604 | |||
Public_name | tsen-54 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tsen | ||||||
Allele (99) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00097285 | ||||||
00097286 | |||||||
00097287 | |||||||
00097288 | |||||||
Contained_in_operon | CEOP4052 | ||||||
Ortholog (24) | |||||||
Structured_description | Automated_description | Predicted to enable endonuclease activity. Predicted to be involved in tRNA-type intron splice site recognition and cleavage. Predicted to be part of tRNA-intron endonuclease complex. Human ortholog(s) of this gene implicated in pontocerebellar hypoplasia type 2A; pontocerebellar hypoplasia type 4; and pontocerebellar hypoplasia type 5. Is an ortholog of human TSEN54 (tRNA splicing endonuclease subunit 54). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model (3) | ||||||
Molecular_info | Corresponding_CDS | F52C12.3 | |||||
Corresponding_transcript | F52C12.3.1 | ||||||
Other_sequence | HC08381 | ||||||
Associated_feature (12) | |||||||
Experimental_info | RNAi_result | WBRNAi00062258 | Inferred_automatically | RNAi_primary | |||
WBRNAi00047928 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032588 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00110855 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015370 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1021893 | ||||||
Expr1038041 | |||||||
Expr1151757 | |||||||
Expr2017535 | |||||||
Expr2035673 | |||||||
Microarray_results (19) | |||||||
Expression_cluster (84) | |||||||
Map_info | Positive | Positive_clone | F52C12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | IV | -12.7356 | |||||
Method | Gene |