WormBase Tree Display for Gene: WBGene00018561
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| WBGene00018561 | SMap | S_parent | Sequence | F47D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gadr-3 | Person_evidence | WBPerson206 | |||||
| Sequence_name | F47D12.5 | ||||||||
| Molecular_name | F47D12.5 | ||||||||
| F47D12.5.1 | |||||||||
| CE43720 | |||||||||
| Other_name | CELE_F47D12.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | gadr-3 | ||||||||
| DB_info | Database | AceView | gene | 3H372 | |||||
| WormQTL | gene | WBGene00018561 | |||||||
| WormFlux | gene | WBGene00018561 | |||||||
| NDB | locus_tag | CELE_F47D12.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018561|UniProtKB=Q09562 | |||||||
| family | PTHR12904 | ||||||||
| NCBI | gene | 185933 | |||||||
| RefSeq | protein | NM_065977.6 | |||||||
| SwissProt | UniProtAcc | Q09562 | |||||||
| TREEFAM | TREEFAM_ID | TF322626 | |||||||
| UniProt_GCRP | UniProtAcc | Q09562 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Oct 2010 11:45:22 | WBPerson2970 | Name_change | CGC_name | gadr-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gadr | ||||||||
| Allele (57) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00054749 | ||||||||
| 00054750 | |||||||||
| 00054751 | |||||||||
| Ortholog (37) | |||||||||
| Paralog (32) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Predicted to be part of Cul2-RING ubiquitin ligase complex. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F47D12.5 | |||||||
| Corresponding_CDS_history | F47D12.5:wp202 | ||||||||
| Corresponding_transcript | F47D12.5.1 | ||||||||
| Associated_feature | WBsf651113 | ||||||||
| WBsf666983 | |||||||||
| WBsf226799 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047648 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032437 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015187 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005305 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019321 | ||||||||
| Expr1037990 | |||||||||
| Expr1151488 | |||||||||
| Expr2011934 | |||||||||
| Expr2030171 | |||||||||
| Drives_construct | WBCnstr00026419 | ||||||||
| Construct_product | WBCnstr00026419 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (140) | |||||||||
| Interaction | WBInteraction000031304 | ||||||||
| WBInteraction000163600 | |||||||||
| WBInteraction000180367 | |||||||||
| WBInteraction000199509 | |||||||||
| WBInteraction000269375 | |||||||||
| WBInteraction000433956 | |||||||||
| WBInteraction000437569 | |||||||||
| WBInteraction000579167 | |||||||||
| Map_info | Map | III | Position | -1.40227 | Error | 0.001448 | |||
| Positive | Positive_clone | F47D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038341 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
