WormBase Tree Display for Gene: WBGene00018557
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| WBGene00018557 | SMap | S_parent | Sequence | F47D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srt-38 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F47D2.6 | ||||||||
| Molecular_name | F47D2.6 | ||||||||
| F47D2.6.1 | |||||||||
| CE10696 | |||||||||
| Other_name | CELE_F47D2.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srt-38 | ||||||||
| DB_info | Database | AceView | gene | 5E740 | |||||
| WormQTL | gene | WBGene00018557 | |||||||
| WormFlux | gene | WBGene00018557 | |||||||
| NDB | locus_tag | CELE_F47D2.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018557|UniProtKB=Q22984 | |||||||
| family | PTHR23021 | ||||||||
| NCBI | gene | 185927 | |||||||
| RefSeq | protein | NM_071777.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315399 | |||||||
| TrEMBL | UniProtAcc | Q22984 | |||||||
| UniProt_GCRP | UniProtAcc | Q22984 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Dec 2004 09:41:19 | WBPerson2970 | Name_change | CGC_name | srt-38 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srt | ||||||||
| Allele (52) | |||||||||
| Strain | WBStrain00003247 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00076905 | ||||||||
| Ortholog (79) | |||||||||
| Paralog (70) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F47D2.6 | |||||||
| Corresponding_transcript | F47D2.6.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00047661 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015194 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6105 | ||||||||
| Expr14149 | |||||||||
| Expr1020517 | |||||||||
| Expr1151498 | |||||||||
| Drives_construct | WBCnstr00003722 | ||||||||
| WBCnstr00026423 | |||||||||
| Construct_product | WBCnstr00026423 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (23) | |||||||||
| Interaction | WBInteraction000180352 | ||||||||
| WBInteraction000270847 | |||||||||
| WBInteraction000337578 | |||||||||
| WBInteraction000342083 | |||||||||
| WBInteraction000363780 | |||||||||
| WBInteraction000415151 | |||||||||
| Map_info | Map | V | Position | -6.15641 | Error | 0.011441 | |||
| Positive | Positive_clone | F47D2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
