WormBase Tree Display for Gene: WBGene00018489
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| WBGene00018489 | SMap | S_parent | Sequence | F46E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F46E10.2 | |||||||
| Molecular_name | F46E10.2 | ||||||||
| F46E10.2.1 | |||||||||
| CE20813 | |||||||||
| Other_name | 5H1 | Accession_evidence | EMBL | AF326941 | |||||
| CELE_F46E10.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | F46E10.2 | ||||||||
| DB_info | Database | AceView | gene | 5H1 | |||||
| WormQTL | gene | WBGene00018489 | |||||||
| WormFlux | gene | WBGene00018489 | |||||||
| NDB | locus_tag | CELE_F46E10.2 | |||||||
| NCBI | gene | 179042 | |||||||
| RefSeq | protein | NM_072257.7 | |||||||
| TrEMBL | UniProtAcc | G5EDS0 | |||||||
| UniProt_GCRP | UniProtAcc | G5EDS0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00052172 | Caenorhabditis remanei | From_analysis | OMA | |||||
| WBGene00038254 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
| OrthoMCL | |||||||||
| OMA | |||||||||
| WBGene00155194 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| WormBase-Compara | |||||||||
| WBGene00119507 | Caenorhabditis japonica | From_analysis | OMA | ||||||
| CSP32.g14910 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g14454 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00018490 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpaapap; ABarpaappa; ABarpaappp; rectal epithelial cell; and rectum based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by seventeen chemicals including 1-methylnicotinamide; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F46E10.2 | |||||||
| Corresponding_transcript | F46E10.2.1 | ||||||||
| Other_sequence | Dviv_isotig28910 | ||||||||
| Oden_isotig10813 | |||||||||
| DA00300 | |||||||||
| JI227960.1 | |||||||||
| GPC02438_1 | |||||||||
| GP00455 | |||||||||
| Oden_isotig10812 | |||||||||
| AS01797 | |||||||||
| AS04286 | |||||||||
| ASC01006_1 | |||||||||
| Associated_feature | WBsf646886 | ||||||||
| WBsf231887 | |||||||||
| WBsf231888 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015089 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047525 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033381 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram227 | ||||||||
| Expr4079 | |||||||||
| Expr1027960 | |||||||||
| Expr1037970 | |||||||||
| Expr1151364 | |||||||||
| Expr2003796 | |||||||||
| Expr2022016 | |||||||||
| Drives_construct | WBCnstr00026476 | ||||||||
| Construct_product | WBCnstr00026476 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (163) | |||||||||
| Interaction (204) | |||||||||
| Map_info | Positive | Positive_clone | F46E10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.000914733 | |||||||
| Method | Gene |
