WormBase Tree Display for Gene: WBGene00018452
expand all nodes | collapse all nodes | view schema
| WBGene00018452 | SMap | S_parent | Sequence | F45D11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F45D11.5 | |||||||
| Molecular_name | F45D11.5 | ||||||||
| F45D11.5.1 | |||||||||
| CE35934 | |||||||||
| Other_name | CELE_F45D11.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F45D11.5 | ||||||||
| DB_info | Database | AceView | gene | 2B293 | |||||
| WormQTL | gene | WBGene00018452 | |||||||
| WormFlux | gene | WBGene00018452 | |||||||
| NDB | locus_tag | CELE_F45D11.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018452|UniProtKB=Q8MYD5 | |||||||
| family | PTHR22743 | ||||||||
| NCBI | gene | 173479 | |||||||
| RefSeq | protein | NM_061481.6 | |||||||
| TREEFAM | TREEFAM_ID | TF315997 | |||||||
| TrEMBL | UniProtAcc | Q8MYD5 | |||||||
| UniProt_GCRP | UniProtAcc | Q8MYD5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (93) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (113) | |||||||||
| Paralog (81) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalpppapa; ABarpapaaa; amphid neurons; cephalic sheath cell; and pharyngeal cell based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and clk-1 based on microarray; tiling array; and RNA-seq studies. Is affected by ten chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F45D11.5 | |||||||
| Corresponding_CDS_history | F45D11.5:wp111 | ||||||||
| Corresponding_transcript | F45D11.5.1 | ||||||||
| Other_sequence | CJC02692_1 | ||||||||
| CRC00690_1 | |||||||||
| CR01975 | |||||||||
| Associated_feature | WBsf643948 | ||||||||
| WBsf220814 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047374 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032289 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014999 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1029067 | ||||||||
| Expr1037953 | |||||||||
| Expr1151225 | |||||||||
| Expr2003743 | |||||||||
| Expr2021963 | |||||||||
| Drives_construct | WBCnstr00026505 | ||||||||
| Construct_product | WBCnstr00026505 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (110) | |||||||||
| Map_info | Positive | Positive_clone | F45D11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -15.5739 | |||||||
| Method | Gene |
