WormBase Tree Display for Gene: WBGene00018415
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WBGene00018415 | SMap | S_parent | Sequence | F44C8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nhr-184 | Person_evidence | WBPerson600 | |||||
Sequence_name | F44C8.9 | ||||||||
Molecular_name | F44C8.9a | ||||||||
F44C8.9a.1 | |||||||||
CE35310 | |||||||||
F44C8.9b | |||||||||
Other_name | F44C8.b | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
F44C8.c | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_F44C8.9 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | nhr-184 | ||||||||
DB_info | Database | AceView | gene | 5C692 | |||||
WormQTL | gene | WBGene00018415 | |||||||
WormFlux | gene | WBGene00018415 | |||||||
NDB | locus_tag | CELE_F44C8.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00018415|UniProtKB=H2L019 | |||||||
family | PTHR45680 | ||||||||
NCBI | gene | 185730 | |||||||
RefSeq | protein | NM_001028755.2 | |||||||
NR_133577.1 | |||||||||
TrEMBL | UniProtAcc | H2L019 | |||||||
UniProt_GCRP | UniProtAcc | H2L019 | |||||||
RNAcentral | URSid | URS00008D2F51 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-184 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (28) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00022759 | ||||||||
00022760 | |||||||||
00022761 | |||||||||
00123565 | |||||||||
00123566 | |||||||||
00123567 | |||||||||
00123568 | |||||||||
Ortholog (24) | |||||||||
Paralog (217) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F44C8.9a | |||||||
Corresponding_CDS_history | F44C8.9:wp107 | ||||||||
F44C8.9b:wp250 | |||||||||
Corresponding_transcript | F44C8.9b | ||||||||
F44C8.9a.1 | |||||||||
Other_sequence | SSC05305_1 | ||||||||
CBC06160_1 | |||||||||
JI171244.1 | |||||||||
JI176378.1 | |||||||||
MI00790 | |||||||||
Associated_feature | WBsf233399 | ||||||||
WBsf233400 | |||||||||
Transcription_factor | WBTranscriptionFactor001011 | ||||||||
Experimental_info | RNAi_result | WBRNAi00076426 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014922 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00047272 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032233 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1013783 | ||||||||
Expr1151127 | |||||||||
Expr2014086 | |||||||||
Expr2032326 | |||||||||
Drives_construct | WBCnstr00026536 | ||||||||
Construct_product | WBCnstr00026536 | ||||||||
Microarray_results (26) | |||||||||
Expression_cluster (104) | |||||||||
Interaction (15) | |||||||||
Map_info | Map | V | Position | -15.3616 | Error | 0.013261 | |||
Positive | Positive_clone | F44C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5399 | |||||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |