WormBase Tree Display for Gene: WBGene00018375
expand all nodes | collapse all nodes | view schema
| WBGene00018375 | SMap | S_parent | Sequence | F43C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F43C9.1 | |||||||
| Molecular_name | F43C9.1 | ||||||||
| F43C9.1.1 | |||||||||
| CE04564 | |||||||||
| Other_name | CELE_F43C9.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F43C9.1 | ||||||||
| DB_info | Database | AceView | gene | XF415 | |||||
| WormQTL | gene | WBGene00018375 | |||||||
| WormFlux | gene | WBGene00018375 | |||||||
| NDB | locus_tag | CELE_F43C9.1 | |||||||
| NCBI | gene | 180754 | |||||||
| RefSeq | protein | NM_076418.7 | |||||||
| TREEFAM | TREEFAM_ID | TF318597 | |||||||
| TrEMBL | UniProtAcc | Q20359 | |||||||
| UniProt_GCRP | UniProtAcc | Q20359 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (56) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in PVT and intestine based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty chemicals including hydrogen sulfide; tryptophan; and Tunicamycin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain and F-box-like domain superfamily. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F43C9.1 | |||||||
| Corresponding_transcript | F43C9.1.1 | ||||||||
| Other_sequence | CRC07956_1 | ||||||||
| CR07549 | |||||||||
| Associated_feature | WBsf648042 | ||||||||
| WBsf662714 | |||||||||
| WBsf662715 | |||||||||
| WBsf662716 | |||||||||
| WBsf1005075 | |||||||||
| WBsf235627 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032178 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047178 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014872 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022572 | ||||||||
| Expr1151040 | |||||||||
| Expr2003670 | |||||||||
| Expr2021888 | |||||||||
| Drives_construct | WBCnstr00026569 | ||||||||
| Construct_product | WBCnstr00026569 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (158) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Positive | Positive_clone | F43C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -6.28513 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
