WormBase Tree Display for Gene: WBGene00018351
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| WBGene00018351 | SMap | S_parent | Sequence | F42G2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F42G2.2 | |||||||
| Molecular_name | F42G2.2a | ||||||||
| F42G2.2a.1 | |||||||||
| CE51913 | |||||||||
| F42G2.2b | |||||||||
| CE51927 | |||||||||
| F42G2.2c | |||||||||
| CE51941 | |||||||||
| F42G2.2b.1 | |||||||||
| F42G2.2b.2 | |||||||||
| F42G2.2c.1 | |||||||||
| Other_name | CELE_F42G2.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F42G2.2 | ||||||||
| DB_info | Database | AceView | gene | 2C717 | |||||
| WormQTL | gene | WBGene00018351 | |||||||
| WormFlux | gene | WBGene00018351 | |||||||
| NDB | locus_tag | CELE_F42G2.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018351|UniProtKB=A0A1T5HUK2 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 259422 | |||||||
| RefSeq | protein | NM_001350376.4 | |||||||
| NM_001381348.1 | |||||||||
| NM_001383800.1 | |||||||||
| TrEMBL | UniProtAcc | A0A1T5HUK2 | |||||||
| A0A1T5HUK1 | |||||||||
| A0A1T5HUW0 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A1T5HUK2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (124) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (32) | |||||||||
| Paralog (220) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalppppaa; ABalpppppa; ABalppppppa; ABalppppppp; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and hsf-1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including Heme; D-glucopyranose; and sesamin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F42G2.2a | |||||||
| F42G2.2b | |||||||||
| F42G2.2c | |||||||||
| Corresponding_CDS_history | F42G2.2:wp258 | ||||||||
| Corresponding_transcript | F42G2.2a.1 | ||||||||
| F42G2.2b.1 | |||||||||
| F42G2.2b.2 | |||||||||
| F42G2.2c.1 | |||||||||
| Associated_feature | WBsf657388 | ||||||||
| WBsf657389 | |||||||||
| WBsf657390 | |||||||||
| WBsf986938 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047111 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014833 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103355 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1150978 | ||||||||
| Expr2003645 | |||||||||
| Expr2021863 | |||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (191) | |||||||||
| Interaction | WBInteraction000296959 | ||||||||
| WBInteraction000297649 | |||||||||
| WBInteraction000301538 | |||||||||
| WBInteraction000394754 | |||||||||
| WBInteraction000411512 | |||||||||
| WBInteraction000431484 | |||||||||
| WBInteraction000432108 | |||||||||
| WBInteraction000443626 | |||||||||
| Map_info | Positive | Positive_clone | F42G2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -13.8193 | |||||||
| Method | Gene |
