WormBase Tree Display for Gene: WBGene00018266
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WBGene00018266 | SMap | S_parent | Sequence | F41B5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nhr-183 | Person_evidence | WBPerson600 | |||||
Sequence_name | F41B5.10 | ||||||||
Molecular_name | F41B5.10 | ||||||||
F41B5.10.1 | |||||||||
CE17819 | |||||||||
Other_name | CELE_F41B5.10 | Accession_evidence | NDB | BX284605 | |||||
Public_name | nhr-183 | ||||||||
DB_info | Database | AceView | gene | 5C738 | |||||
WormQTL | gene | WBGene00018266 | |||||||
WormFlux | gene | WBGene00018266 | |||||||
NDB | locus_tag | CELE_F41B5.10 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00018266|UniProtKB=O16677 | |||||||
family | PTHR45680 | ||||||||
NCBI | gene | 185594 | |||||||
RefSeq | protein | NM_071220.2 | |||||||
TREEFAM | TREEFAM_ID | TF315604 | |||||||
TrEMBL | UniProtAcc | O16677 | |||||||
UniProt_GCRP | UniProtAcc | O16677 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-183 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (111) | |||||||||
Strain | WBStrain00035316 | ||||||||
WBStrain00035317 | |||||||||
WBStrain00035318 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00028474 | ||||||||
00028475 | |||||||||
00028476 | |||||||||
00123450 | |||||||||
00123451 | |||||||||
00123452 | |||||||||
00123453 | |||||||||
Ortholog (29) | |||||||||
Paralog (218) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in head neurons; tail neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F41B5.10 | |||||||
Corresponding_transcript | F41B5.10.1 | ||||||||
Associated_feature | WBsf652504 | ||||||||
WBsf668796 | |||||||||
WBsf978500 | |||||||||
WBsf999485 | |||||||||
WBsf1019279 | |||||||||
WBsf233405 | |||||||||
Transcription_factor | WBTranscriptionFactor001009 | ||||||||
Experimental_info | RNAi_result | WBRNAi00046942 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014716 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032070 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram46 | ||||||||
Chronogram60 | |||||||||
Chronogram89 | |||||||||
Expr7553 | |||||||||
Expr1019643 | |||||||||
Expr1037866 | |||||||||
Expr1150809 | |||||||||
Expr2014085 | |||||||||
Expr2032325 | |||||||||
Drives_construct | WBCnstr00001126 | ||||||||
WBCnstr00001127 | |||||||||
WBCnstr00001128 | |||||||||
WBCnstr00012698 | |||||||||
WBCnstr00026655 | |||||||||
Construct_product | WBCnstr00026655 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (168) | |||||||||
Interaction | WBInteraction000247141 | ||||||||
WBInteraction000381630 | |||||||||
Map_info | Map | V | Position | -15.0859 | Error | 0.017588 | |||
Positive | Positive_clone | F41B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5365 | |||||||
5378 | |||||||||
4829 | |||||||||
4860 | |||||||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |