WormBase Tree Display for Gene: WBGene00018240
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WBGene00018240 | SMap | S_parent | Sequence | F40G9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | cox-17 | Person_evidence | WBPerson261 | |||||
Sequence_name | F40G9.2 | ||||||||
Molecular_name | F40G9.2 | ||||||||
F40G9.2.1 | |||||||||
CE19849 | |||||||||
Other_name | CELE_F40G9.2 | Accession_evidence | NDB | BX284603 | |||||
Public_name | cox-17 | ||||||||
DB_info | Database | AceView | gene | 3A809 | |||||
WormQTL | gene | WBGene00018240 | |||||||
WormFlux | gene | WBGene00018240 | |||||||
NDB | locus_tag | CELE_F40G9.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00018240|UniProtKB=Q9TZ68 | |||||||
family | PTHR16719 | ||||||||
NCBI | gene | 175186 | |||||||
RefSeq | protein | NM_064774.5 | |||||||
TREEFAM | TREEFAM_ID | TF105074 | |||||||
TrEMBL | UniProtAcc | Q9TZ68 | |||||||
UniProt_GCRP | UniProtAcc | Q9TZ68 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 25 Jan 2013 14:30:54 | WBPerson2970 | Name_change | CGC_name | cox-17 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cox | ||||||||
Allele (36) | |||||||||
Strain | WBStrain00003229 | ||||||||
WBStrain00037516 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00097839 | ||||||||
00097840 | |||||||||
00097841 | |||||||||
00097842 | |||||||||
00097843 | |||||||||
00123424 | |||||||||
00123425 | |||||||||
00123426 | |||||||||
Contained_in_operon | CEOP3016 | ||||||||
Ortholog (11) | |||||||||
Structured_description | Automated_description | Predicted to enable copper chaperone activity. Predicted to be involved in mitochondrial cytochrome c oxidase assembly. Predicted to be located in mitochondrial intermembrane space. Is an ortholog of human COX17 (cytochrome c oxidase copper chaperone COX17). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F40G9.2 | |||||||
Corresponding_transcript | F40G9.2.1 | ||||||||
Other_sequence | PPC05782_1 | ||||||||
Associated_feature | WBsf991003 | ||||||||
WBsf991004 | |||||||||
WBsf991005 | |||||||||
WBsf224347 | |||||||||
Experimental_info | RNAi_result | WBRNAi00032053 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00000666 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006781 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00046909 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram1628 | ||||||||
Expr6018 | |||||||||
Expr1017197 | |||||||||
Expr1150779 | |||||||||
Expr2010473 | |||||||||
Expr2028713 | |||||||||
Drives_construct | WBCnstr00003704 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (140) | |||||||||
Interaction (31) | |||||||||
Map_info | Map | III | Position | -26.92 | |||||
Positive | Positive_clone | F40G9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (2) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |