WormBase Tree Display for Gene: WBGene00018105
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WBGene00018105 | SMap | S_parent | Sequence | F36H5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | clec-19 | Person_evidence | WBPerson655 | |||||
Sequence_name | F36H5.6 | ||||||||
Molecular_name | F36H5.6 | ||||||||
F36H5.6.1 | |||||||||
CE46270 | |||||||||
Other_name | CELE_F36H5.6 | Accession_evidence | NDB | BX284602 | |||||
Public_name | clec-19 | ||||||||
DB_info | Database | AceView | gene | 2C33 | |||||
WormQTL | gene | WBGene00018105 | |||||||
WormFlux | gene | WBGene00018105 | |||||||
NDB | locus_tag | CELE_F36H5.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00018105|UniProtKB=P91292 | |||||||
family | PTHR22991 | ||||||||
NCBI | gene | 185385 | |||||||
RefSeq | protein | NM_061665.3 | |||||||
TREEFAM | TREEFAM_ID | TF351663 | |||||||
TrEMBL | UniProtAcc | P91292 | |||||||
UniProt_GCRP | UniProtAcc | P91292 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 29 Apr 2005 13:53:45 | WBPerson2970 | Name_change | CGC_name | clec-19 | ||||
3 | 20 Jul 2011 09:28:11 | WBPerson1867 | Event | Split_into | WBGene00206518 | ||||
Split_into | WBGene00206518 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (38) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (19) | |||||||||
Paralog (52) | |||||||||
Structured_description | Automated_description | Is affected by several genes including daf-2; eat-2; and pgl-1 based on RNA-seq and microarray studies. Is affected by nine chemicals including methylmercuric chloride; metformin; and Sirolimus based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F36H5.6 | |||||||
Corresponding_transcript | F36H5.6.1 | ||||||||
Associated_feature | WBsf986799 | ||||||||
Experimental_info | RNAi_result | WBRNAi00046546 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014459 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00098904 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1019737 | ||||||||
Expr1150437 | |||||||||
Expr2028355 | |||||||||
Microarray_results (14) | |||||||||
Expression_cluster (48) | |||||||||
SAGE_tag | SAGE:aagatgtgct | Strand | Antisense | ||||||
SAGE:taattcttca | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:aacatttttc | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:caatgggtcc | Strand | Antisense | |||||||
Interaction (24) | |||||||||
Map_info | Map | II | Position | -14.5135 | Error | 0.002355 | |||
Positive | Positive_clone | F36H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00031002 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |