WormBase Tree Display for Gene: WBGene00018100
expand all nodes | collapse all nodes | view schema
| WBGene00018100 | SMap | S_parent | Sequence | F36H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | math-26 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F36H5.1 | ||||||||
| Molecular_name | F36H5.1 | ||||||||
| F36H5.1.1 | |||||||||
| CE27156 | |||||||||
| Other_name | CELE_F36H5.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | math-26 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:54:47 | WBPerson2970 | Name_change | CGC_name | math-26 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | math | ||||||||
| Allele (161) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (85) | |||||||||
| Structured_description | Concise_description | The F36H5.1 gene encodes a protein closely similar to F36H5.2, which has a meprin-associated Traf homology (MATH) domain and may be involved in apoptosis. | Paper_evidence | WBPaper00004589 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in AIN; head mesodermal cell; intestine; and mechanosensory neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and dpy-10 based on RNA-seq and microarray studies. Is affected by fourteen chemicals including D-glucose; levamisole; and stavudine based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F36H5.1 | |||||||
| Corresponding_transcript | F36H5.1.1 | ||||||||
| Associated_feature | WBsf986810 | ||||||||
| WBsf1011627 | |||||||||
| WBsf220875 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014455 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022351 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046538 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1037798 | ||||||||
| Expr1150427 | |||||||||
| Expr2013402 | |||||||||
| Expr2031636 | |||||||||
| Drives_construct | WBCnstr00026779 | ||||||||
| Construct_product | WBCnstr00026779 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (152) | |||||||||
| Interaction | WBInteraction000102994 | ||||||||
| WBInteraction000103376 | |||||||||
| WBInteraction000265777 | |||||||||
| WBInteraction000346697 | |||||||||
| WBInteraction000380330 | |||||||||
| WBInteraction000415047 | |||||||||
| WBInteraction000419987 | |||||||||
| WBInteraction000585446 | |||||||||
| Map_info | Map | II | Position | -14.452 | Error | 0.004894 | |||
| Positive | Positive_clone | F36H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
