WormBase Tree Display for Gene: WBGene00018021
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| WBGene00018021 | SMap | S_parent | Sequence | F34D6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F34D6.1 | |||||||
| Molecular_name | F34D6.1 | ||||||||
| F34D6.1.1 | |||||||||
| CE28866 | |||||||||
| Other_name | CELE_F34D6.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F34D6.1 | ||||||||
| DB_info | Database | AceView | gene | 2C970 | |||||
| WormQTL | gene | WBGene00018021 | |||||||
| WormFlux | gene | WBGene00018021 | |||||||
| NDB | locus_tag | CELE_F34D6.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018021|UniProtKB=O17183 | |||||||
| family | PTHR21503 | ||||||||
| NCBI | gene | 173612 | |||||||
| RefSeq | protein | NM_061930.6 | |||||||
| TREEFAM | TREEFAM_ID | TF322477 | |||||||
| TrEMBL | UniProtAcc | O17183 | |||||||
| UniProt_GCRP | UniProtAcc | O17183 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (54) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (248) | |||||||||
| Paralog (63) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including ABalaaaala; ABalaapaaa; ABalppappa; NSM; and amphid neurons based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sek-1 based on microarray; tiling array; and RNA-seq studies. Is affected by sixteen chemicals including methylmercuric chloride; Mercuric Chloride; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; Phosphorylation site; and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F34D6.1 | |||||||
| Corresponding_transcript | F34D6.1.1 | ||||||||
| Associated_feature | WBsf649935 | ||||||||
| WBsf649936 | |||||||||
| WBsf665403 | |||||||||
| WBsf987009 | |||||||||
| WBsf987010 | |||||||||
| WBsf222779 | |||||||||
| WBsf222780 | |||||||||
| WBsf222781 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046254 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014270 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027371 | ||||||||
| Expr1037766 | |||||||||
| Expr1150140 | |||||||||
| Expr2003281 | |||||||||
| Expr2021495 | |||||||||
| Drives_construct | WBCnstr00010252 | ||||||||
| WBCnstr00026834 | |||||||||
| Construct_product | WBCnstr00026834 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction (165) | |||||||||
| Map_info | Positive | Positive_clone | F34D6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -12.1553 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
