WormBase Tree Display for Gene: WBGene00017934
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| WBGene00017934 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | osgn-1 | Person_evidence | WBPerson350 | |||||
| Sequence_name | F30B5.4 | ||||||||
| Molecular_name | F30B5.4a | ||||||||
| F30B5.4a.1 | |||||||||
| CE28552 | |||||||||
| F30B5.4b | |||||||||
| CE48830 | |||||||||
| F30B5.4c | |||||||||
| CE48829 | |||||||||
| F30B5.4b.1 | |||||||||
| F30B5.4c.1 | |||||||||
| Other_name | F30B5.4 | Person_evidence | WBPerson350 | ||||||
| CELE_F30B5.4 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | osgn-1 | ||||||||
| DB_info | Database | AceView | gene | 4E981 | |||||
| WormQTL | gene | WBGene00017934 | |||||||
| WormFlux | gene | WBGene00017934 | |||||||
| NDB | locus_tag | CELE_F30B5.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017934|UniProtKB=Q19910 | |||||||
| family | PTHR15192 | ||||||||
| NCBI | gene | 177185 | |||||||
| RefSeq | protein | NM_001380182.1 | |||||||
| NM_001380183.1 | |||||||||
| NM_068113.6 | |||||||||
| SwissProt | UniProtAcc | Q19910 | |||||||
| TrEMBL | UniProtAcc | U4PR82 | |||||||
| U4PC89 | |||||||||
| UniProt_GCRP | UniProtAcc | Q19910 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 03 Oct 2022 16:11:53 | WBPerson21950 | Name_change | CGC_name | osgn-1 | ||||
| Other_name | F30B5.4 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | osgn | ||||||||
| Allele (176) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00066314 | ||||||||
| 00066315 | |||||||||
| Ortholog (39) | |||||||||
| Structured_description | Automated_description | Enriched in XXX cell; germ line; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including Zidovudine; metformin; and Sirolimus based on RNA-seq and microarray studies. Human OSGIN1 enables growth factor activity. Is predicted to encode a protein with the following domains: OKL38 family and FAD/NAD(P)-binding domain superfamily. Is an ortholog of human OSGIN1 (oxidative stress induced growth inhibitor 1) and OSGIN2 (oxidative stress induced growth inhibitor family member 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F30B5.4a | |||||||
| F30B5.4b | |||||||||
| F30B5.4c | |||||||||
| Corresponding_CDS_history | F30B5.4:wp129 | ||||||||
| F30B5.4a:wp130 | |||||||||
| F30B5.4b:wp130 | |||||||||
| Corresponding_transcript | F30B5.4a.1 | ||||||||
| F30B5.4b.1 | |||||||||
| F30B5.4c.1 | |||||||||
| Other_sequence (20) | |||||||||
| Associated_feature (18) | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr1013796 | ||||||||
| Expr1037714 | |||||||||
| Expr1149861 | |||||||||
| Expr2003158 | |||||||||
| Expr2021371 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction | WBInteraction000028798 | ||||||||
| WBInteraction000458785 | |||||||||
| WBInteraction000504480 | |||||||||
| WBInteraction000518088 | |||||||||
| WBInteraction000518132 | |||||||||
| WBInteraction000518210 | |||||||||
| WBInteraction000518260 | |||||||||
| WBInteraction000518296 | |||||||||
| WBInteraction000518341 | |||||||||
| Map_info | Map | IV | Position | -0.141367 | |||||
| Positive | Positive_clone | F30B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
