WormBase Tree Display for Gene: WBGene00017933
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WBGene00017933 | SMap | S_parent | Sequence | F29G9 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | F29G9.7 | |||||
Molecular_name | F29G9.7 | ||||||
Other_name | CELE_F29G9.7 | Accession_evidence | NDB | BX284605 | |||
Public_name | F29G9.7 | ||||||
DB_info | Database | AceView | gene | 5G514 | |||
WormQTL | gene | WBGene00017933 | |||||
WormFlux | gene | WBGene00017933 | |||||
NDB | locus_tag | CELE_F29G9.7 | |||||
NCBI | gene | 185123 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0000336 | |||||
Allele (30) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00031964 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||
WBGene00152591 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||
Paralog (58) | |||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. | Paper_evidence | WBPaper00012854 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enriched in several structures, including ABalpppppp; ABpraaappp; NSM; excretory system; and germ line based on RNA-seq; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and lin-4 based on microarray and RNA-seq studies. Is affected by ten chemicals including hydrogen sulfide; stavudine; and Rifampin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS_history | F29G9.7:wp125 | |||||
F29G9.7:wp261 | |||||||
Corresponding_pseudogene | F29G9.7 | ||||||
Associated_feature | WBsf668979 | ||||||
WBsf668980 | |||||||
WBsf668981 | |||||||
WBsf1000159 | |||||||
WBsf1019727 | |||||||
WBsf233750 | |||||||
Experimental_info | Expr_pattern | Expr1025463 | |||||
Expr1149845 | |||||||
Expr2003147 | |||||||
Expr2021360 | |||||||
Drives_construct | WBCnstr00026904 | ||||||
Construct_product | WBCnstr00026904 | ||||||
Microarray_results | SMD_F29G9.7 | ||||||
A_12_P104881 | |||||||
GPL14144_F29G9.7_547-606_0.941_1_A | |||||||
GPL19516_CGZ0018961 | |||||||
GPL21109_F29G9.7 | |||||||
GPL8304_CE_WBGene00017933_A | |||||||
GPL8673_F29G9_7P00111 | |||||||
GPL8673_F29G9_7P00684 | |||||||
GPL8673_F29G9_7P00802 | |||||||
cea2.d.22606 | |||||||
Expression_cluster (104) | |||||||
Interaction (11) | |||||||
Map_info | Positive | Positive_clone | F29G9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | V | -0.415895 | |||||
Reference | WBPaper00012854 | ||||||
WBPaper00065394 | |||||||
Method | Gene |