WormBase Tree Display for Gene: WBGene00017930
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| WBGene00017930 | SMap | S_parent | Sequence | F29G9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F29G9.1 | |||||||
| Molecular_name | F29G9.1 | ||||||||
| F29G9.1.1 | |||||||||
| CE35297 | |||||||||
| Other_name | CELE_F29G9.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F29G9.1 | ||||||||
| DB_info | Database | AceView | gene | 5G519 | |||||
| WormQTL | gene | WBGene00017930 | |||||||
| WormFlux | gene | WBGene00017930 | |||||||
| NDB | locus_tag | CELE_F29G9.1 | |||||||
| NCBI | gene | 185122 | |||||||
| RefSeq | protein | NM_072162.7 | |||||||
| TrEMBL | UniProtAcc | O16373 | |||||||
| UniProt_GCRP | UniProtAcc | O16373 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (39) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrIII_pilon.g9182 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00021188 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00021607 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00164974 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00194981 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaaaala; ABalaaaarl; ABalaaaarr; amphid neurons; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on microarray; tiling array; and RNA-seq studies. Is affected by ten chemicals including hydrogen sulfide; D-glucose; and Rifampin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F29G9.1 | |||||||
| Corresponding_CDS_history | F29G9.1:wp107 | ||||||||
| Corresponding_transcript | F29G9.1.1 | ||||||||
| Associated_feature | WBsf646850 | ||||||||
| WBsf1000160 | |||||||||
| WBsf1019728 | |||||||||
| WBsf231830 | |||||||||
| WBsf231831 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020058 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031587 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014114 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021556 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045941 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045940 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1029090 | ||||||||
| Expr1149839 | |||||||||
| Expr2003146 | |||||||||
| Expr2021359 | |||||||||
| Drives_construct | WBCnstr00026906 | ||||||||
| Construct_product | WBCnstr00026906 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction | WBInteraction000242838 | ||||||||
| WBInteraction000293455 | |||||||||
| WBInteraction000372134 | |||||||||
| WBInteraction000400329 | |||||||||
| Map_info | Positive | Positive_clone | F29G9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -0.409215 | |||||||
| Method | Gene |
