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WormBase Tree Display for Gene: WBGene00017920

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Name Class

WBGene00017920SMapS_parentSequenceF29B9
IdentityVersion2
NameCGC_namejmjd-1.2Person_evidenceWBPerson260
Sequence_nameF29B9.2
Molecular_nameF29B9.2a
F29B9.2a.1
CE09781
F29B9.2b
CE27145
F29B9.2c
CE48643
F29B9.2b.1
F29B9.2c.1
Other_nameCeKDM7APaper_evidenceWBPaper00040011
CELE_F29B9.2Accession_evidenceNDBBX284604
Public_namejmjd-1.2
DB_infoDatabase (14)
SpeciesCaenorhabditis elegans
HistoryVersion_change (2)
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classjmjd
Allele (59)
StrainWBStrain00037581
RNASeq_FPKM (74)
GO_annotation (31)
Contained_in_operonCEOP4136
Ortholog (45)
ParalogWBGene00005013Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020821Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_description (2)
Disease_infoExperimental_modelDOID:0060309Homo sapiensPaper_evidenceWBPaper00050709
Curator_confirmedWBPerson324
Date_last_updated13 Nov 2017 00:00:00
Potential_modelDOID:10283Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:20672)
DOID:1909Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:22224)
DOID:0060812Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:20672)
Models_disease_assertedWBDOannot00000447
Molecular_infoCorresponding_CDSF29B9.2a
F29B9.2b
F29B9.2c
Corresponding_transcriptF29B9.2a.1
F29B9.2b.1
F29B9.2c.1
Other_sequence (65)
Associated_featureWBsf047593
WBsf047594
WBsf645943
WBsf977089
WBsf996358
WBsf228223
WBsf228224
Experimental_infoRNAi_result (11)
Expr_patternExpr13259
Expr13525
Expr1021912
Expr1037705
Expr1149803
Expr2012886
Expr2031120
Drives_constructWBCnstr00026915
Construct_productWBCnstr00026915
Regulate_expr_clusterWBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:rgef-1pjmjd-1.2(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00050709:jmjd-1.2(tm3713)_regulated
WBPaper00062156:jmjd-1.2(zr1010)_downregulated
WBPaper00062156:jmjd-1.2(zr1010)_upregulated
WBPaper00066083:hlh-17p-jmjd-1.2_downregulated
WBPaper00066083:hlh-17p-jmjd-1.2_upregulated
AntibodyWBAntibody00002197
WBAntibody00002746
Microarray_results (27)
Expression_cluster (115)
Interaction (18)
Map_infoMapIVPosition0.6425Error0.013666
PositivePositive_cloneF29B9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (18)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene