WormBase Tree Display for Gene: WBGene00017792
expand all nodes | collapse all nodes | view schema
| WBGene00017792 | SMap | S_parent | Sequence | F25E5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F25E5.16 | |||||||
| Molecular_name | F25E5.16a | ||||||||
| F25E5.16a.1 | |||||||||
| CE32872 | |||||||||
| F25E5.16b | |||||||||
| CE43355 | |||||||||
| F25E5.16b.1 | |||||||||
| Other_name | CELE_F25E5.16 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F25E5.16 | ||||||||
| DB_info | Database | AceView | gene | 5H921 | |||||
| WormQTL | gene | WBGene00017792 | |||||||
| WormFlux | gene | WBGene00017792 | |||||||
| NDB | locus_tag | CELE_F25E5.16 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017792|UniProtKB=H2KYV6 | |||||||
| family | PTHR47022 | ||||||||
| NCBI | gene | 179131 | |||||||
| RefSeq | protein | NM_001269156.3 | |||||||
| NM_001373053.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF351658 | |||||||
| TrEMBL | UniProtAcc | B7E2K7 | |||||||
| H2KYV6 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KYV6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog | WBGene00016268 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Enriched in ABalppappa; ABarappppa; head mesodermal cell; hypodermis; and neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by five chemicals including Psoralens; allantoin; and metformin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and TRAF-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F25E5.16a | |||||||
| F25E5.16b | |||||||||
| Corresponding_transcript | F25E5.16a.1 | ||||||||
| F25E5.16b.1 | |||||||||
| Associated_feature | WBsf231980 | ||||||||
| WBsf231981 | |||||||||
| WBsf231982 | |||||||||
| Experimental_info | Expr_pattern | Expr1026631 | |||||||
| Expr1037645 | |||||||||
| Expr1149424 | |||||||||
| Expr2002957 | |||||||||
| Expr2021173 | |||||||||
| Drives_construct | WBCnstr00027011 | ||||||||
| Construct_product | WBCnstr00027011 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (97) | |||||||||
| Interaction | WBInteraction000340335 | ||||||||
| Map_info | Positive | Positive_clone | F25E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.750454 | |||||||
| Method | Gene |
