WormBase Tree Display for Gene: WBGene00017607
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| WBGene00017607 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F19F10.11 | |||||||
| Molecular_name | F19F10.11a | ||||||||
| F19F10.11a.1 | |||||||||
| CE09491 | |||||||||
| F19F10.11b | |||||||||
| CE09492 | |||||||||
| F19F10.11b.1 | |||||||||
| Other_name | CELE_F19F10.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F19F10.11 | ||||||||
| DB_info | Database | AceView | gene | 5I62 | |||||
| WormQTL | gene | WBGene00017607 | |||||||
| WormFlux | gene | WBGene00017607 | |||||||
| NDB | locus_tag | CELE_F19F10.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017607|UniProtKB=H2KZD6 | |||||||
| family | PTHR22716 | ||||||||
| NCBI | gene | 179143 | |||||||
| RefSeq | protein | NM_072555.6 | |||||||
| NM_072554.8 | |||||||||
| TREEFAM | TREEFAM_ID | TF317492 | |||||||
| TrEMBL | UniProtAcc | H2KZD6 | |||||||
| O01526 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZD6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (72) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00122954 | ||||||||
| Ortholog (18) | |||||||||
| Paralog | WBGene00002148 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00009728 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009788 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012524 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00014040 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017606 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00023497 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022067 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020729 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Concise_description | F19F10.11 encodes a protein with a THAP or THAP-like domain; otherproteins with such domains include LIN-15A, LIN-15B, LIN-36, and HIM-17(which all interact with LIN-35/Rb), as well as CDC-14B, CTB-1, GON-14,and ~100 other proteins such as Drosophila P element transposase andhuman nuclear proapoptotic factor THAP1. | Paper_evidence | WBPaper00025108 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 08 May 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable kinase activity. Predicted to be involved in negative regulation of vulval development and phosphorylation. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F19F10.11a | |||||||
| F19F10.11b | |||||||||
| Corresponding_transcript | F19F10.11a.1 | ||||||||
| F19F10.11b.1 | |||||||||
| Other_sequence | CRC11788_1 | ||||||||
| CR11623 | |||||||||
| Associated_feature | WBsf233962 | ||||||||
| WBsf233963 | |||||||||
| WBsf233964 | |||||||||
| WBsf233965 | |||||||||
| WBsf233966 | |||||||||
| WBsf233967 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045022 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00081531 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081506 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012225 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031137 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2108 | ||||||||
| Expr1014228 | |||||||||
| Expr1037564 | |||||||||
| Expr1148984 | |||||||||
| Expr2002750 | |||||||||
| Expr2020967 | |||||||||
| Drives_construct | WBCnstr00027165 | ||||||||
| Construct_product | WBCnstr00027165 | ||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (87) | |||||||||
| Interaction | WBInteraction000231617 | ||||||||
| WBInteraction000327070 | |||||||||
| WBInteraction000352565 | |||||||||
| WBInteraction000442439 | |||||||||
| WBInteraction000547853 | |||||||||
| Map_info | Positive | Positive_clone | F19F10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.813498 | |||||||
| Method | Gene |
