WormBase Tree Display for Gene: WBGene00017519
expand all nodes | collapse all nodes | view schema
WBGene00017519 | SMap | S_parent | Sequence | F16G10 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | hpo-25 | Paper_evidence | WBPaper00038231 | |||
Person_evidence | WBPerson26 | ||||||
Sequence_name | F16G10.4 | ||||||
Molecular_name | F16G10.4 | ||||||
F16G10.4.1 | |||||||
CE19393 | |||||||
Other_name | CELE_F16G10.4 | Accession_evidence | NDB | BX284602 | |||
Public_name | hpo-25 | ||||||
DB_info | Database | AceView | gene | 2C659 | |||
WormQTL | gene | WBGene00017519 | |||||
WormFlux | gene | WBGene00017519 | |||||
NDB | locus_tag | CELE_F16G10.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00017519|UniProtKB=O76588 | |||||
family | PTHR21453 | ||||||
NCBI | gene | 184579 | |||||
RefSeq | protein | NM_061856.1 | |||||
TREEFAM | TREEFAM_ID | TF322011 | |||||
TrEMBL | UniProtAcc | O76588 | |||||
UniProt_GCRP | UniProtAcc | O76588 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | hpo | ||||||
Allele (33) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00038533 | ||||||
Ortholog | WBGene00040996 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||
WBGene00040997 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||
CBOVI.g1498 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||
CBOVI.g8057 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||
CSP38.g7933 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||
chrII_pilon.g3665 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog (88) | |||||||
Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F16G10.4 | |||||
Corresponding_transcript | F16G10.4.1 | ||||||
Experimental_info | RNAi_result | WBRNAi00013420 | Inferred_automatically | RNAi_primary | |||
WBRNAi00044819 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00088656 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00088763 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1018534 | ||||||
Expr1148783 | |||||||
Expr2012564 | |||||||
Expr2030801 | |||||||
Drives_construct | WBCnstr00027239 | ||||||
Construct_product | WBCnstr00027239 | ||||||
Microarray_results (14) | |||||||
Expression_cluster (30) | |||||||
SAGE_tag | SAGE:tccagatttggcgaatt | Strand | Sense | ||||
Unambiguously_mapped | |||||||
Interaction (54) | |||||||
Map_info | Map | II | Position | -13.8308 | Error | 0.000632 | |
Positive | Positive_clone | F16G10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |