WormBase Tree Display for Gene: WBGene00017509
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| WBGene00017509 | SMap | S_parent | Sequence | F16B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F16B4.7 | |||||||
| Molecular_name | F16B4.7 | ||||||||
| F16B4.7.1 | |||||||||
| CE17017 | |||||||||
| Other_name | CELE_F16B4.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F16B4.7 | ||||||||
| DB_info | Database | AceView | gene | 5C65 | |||||
| WormQTL | gene | WBGene00017509 | |||||||
| WormFlux | gene | WBGene00017509 | |||||||
| NDB | locus_tag | CELE_F16B4.7 | |||||||
| NCBI | gene | 178646 | |||||||
| RefSeq | protein | NM_071046.5 | |||||||
| TrEMBL | UniProtAcc | O44629 | |||||||
| UniProt_GCRP | UniProtAcc | O44629 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01499528 | ||||||||
| WBVar00450387 | |||||||||
| WBVar01499167 | |||||||||
| WBVar01499740 | |||||||||
| WBVar00987545 | |||||||||
| WBVar01499784 | |||||||||
| WBVar01499631 | |||||||||
| WBVar01499632 | |||||||||
| WBVar01499496 | |||||||||
| WBVar01500066 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00028844 | Caenorhabditis briggsae | From_analysis | OMA | |||||
| WBGene00062071 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| WBGene00125615 | Caenorhabditis japonica | From_analysis | OMA | ||||||
| WBGene00162285 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| WBGene00163366 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| chrV_pilon.g13250 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in ABplaapappp; ABpraapappp; PVT; and cholinergic neurons based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by seventeen chemicals including rotenone; Ag nanoparticles; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F16B4.7 | |||||||
| Corresponding_transcript | F16B4.7.1 | ||||||||
| Associated_feature | WBsf661139 | ||||||||
| WBsf231427 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00098177 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044795 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031032 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013409 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103283 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017958 | ||||||||
| Expr1037524 | |||||||||
| Expr1148758 | |||||||||
| Expr2002652 | |||||||||
| Expr2020869 | |||||||||
| Drives_construct | WBCnstr00027246 | ||||||||
| Construct_product | WBCnstr00027246 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction (69) | |||||||||
| Map_info | Positive | Positive_clone | F16B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -18.4714 | |||||||
| Reference | WBPaper00064623 | ||||||||
| Method | Gene |
