WormBase Tree Display for Gene: WBGene00017461

WBGene00017461 SMap: S_parent: Sequence: F14D2
  Identity: Version: 2
    Name: CGC_name: bath-28 Person_evidence: WBPerson655
      Sequence_name: F14D2.13
      Molecular_name: F14D2.13a
        F14D2.13a.1
        CE36998
        F14D2.13b
        CE41891
        F14D2.13b.1
      Other_name: CELE_F14D2.13 Accession_evidence: NDB BX284602
      Public_name: bath-28
    DB_info: Database: WormQTL gene WBGene00017461
        WormFlux gene WBGene00017461
        NDB locus_tag CELE_F14D2.13
        Panther gene CAEEL|WormBase=WBGene00017461|UniProtKB=H2KZR8
          family PTHR23015
        NCBI gene 259426
        RefSeq protein NM_001129133.5
            NM_182199.7
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc Q6A585
            H2KZR8
        UniProt_GCRP UniProtAcc H2KZR8
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 22 Aug 2005 16:08:42 WBPerson2970 Name_change: CGC_name: bath-28
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: bath
    Allele (55)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP2092
    Ortholog: WBGene00023954 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00033413 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00035626 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00037960 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00041155 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00041890 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00145284 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00163948 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00160936 Caenorhabditis brenneri From_analysis: Inparanoid_8
    Paralog (217)
    Structured_description: Automated_description: Enriched in PVT; germ line; germline precursor cell; head mesodermal cell; and intestine based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including manganese chloride; Zidovudine; and bisphenol A based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F14D2.13a
      F14D2.13b
    Corresponding_CDS_history: F14D2.13:wp127
      F14D2.13:wp185
    Corresponding_transcript: F14D2.13a.1
      F14D2.13b.1
    Other_sequence: CBC10531_1
    Associated_feature: WBsf665432
      WBsf665433
      WBsf222846
      WBsf222847
  Experimental_info: RNAi_result: WBRNAi00077829 Inferred_automatically: RNAi_primary
      WBRNAi00082522 Inferred_automatically: RNAi_primary
      WBRNAi00013274 Inferred_automatically: RNAi_primary
      WBRNAi00007749 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014697
      Expr1037512
      Expr1148548
      Expr2009544
      Expr2027781
    Drives_construct: WBCnstr00027281
    Construct_product: WBCnstr00027281
    Microarray_results (14)
    Expression_cluster (77)
  Map_info: Map: II Position: -6.64945 Error: 0.022097
    Positive: Positive_clone: F14D2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene