WormBase Tree Display for Gene: WBGene00017307
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WBGene00017307 | SMap | S_parent | Sequence | F09F9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F09F9.2 | |||||||
Molecular_name (3) | |||||||||
Other_name | CELE_F09F9.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | F09F9.2 | ||||||||
DB_info | Database | AceView | gene | XE728 | |||||
WormQTL | gene | WBGene00017307 | |||||||
WormFlux | gene | WBGene00017307 | |||||||
NDB | locus_tag | CELE_F09F9.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017307|UniProtKB=Q19281 | |||||||
family | PTHR37435 | ||||||||
NCBI | gene | 184263 | |||||||
RefSeq | protein | NM_076297.6 | |||||||
TREEFAM | TREEFAM_ID | TF319749 | |||||||
TrEMBL | UniProtAcc | Q19281 | |||||||
UniProt_GCRP | UniProtAcc | Q19281 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (20) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (25) | |||||||||
Paralog | WBGene00001068 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00008511 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00017998 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00017420 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00021326 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Enriched in several structures, including germline precursor cell; interfacial epithelial cell; mechanosensory neurons; rectum; and tail hypodermis based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-six chemicals including methylmercury hydroxide; 1-methylnicotinamide; and manganese chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F09F9.2 | |||||||
Corresponding_transcript | F09F9.2.1 | ||||||||
Other_sequence | GPC02905_1 | ||||||||
Dviv_isotig23942 | |||||||||
GP01925 | |||||||||
Associated_feature | WBsf653884 | ||||||||
WBsf1004829 | |||||||||
WBsf1004830 | |||||||||
WBsf1022725 | |||||||||
WBsf237242 | |||||||||
Experimental_info | RNAi_result (3) | ||||||||
Expr_pattern | Expr1012542 | ||||||||
Expr1037439 | |||||||||
Expr1148129 | |||||||||
Expr2002358 | |||||||||
Expr2020576 | |||||||||
Drives_construct | WBCnstr00027403 | ||||||||
Construct_product | WBCnstr00027403 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (257) | |||||||||
Interaction (172) | |||||||||
Map_info | Positive | Positive_clone | F09F9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | -8.4134 | |||||||
Method | Gene |