WormBase Tree Display for Gene: WBGene00017304
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WBGene00017304 | SMap | S_parent | Sequence | F09F7 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | nmad | |||||
Allele (31) | ||||||
Strain | WBStrain00037403 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation (25) | ||||||
Ortholog (38) | ||||||
Structured_description | Automated_description | Enables oxidative DNA demethylase activity. Involved in several processes, including meiotic chromosome condensation; positive regulation of double-strand break repair; and positive regulation of reproductive process. Predicted to be located in nucleus. Expressed in muscle cell. Is an ortholog of human ALKBH4 (alkB homolog 4, lysine demethylase). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F09F7.7a | ||||
F09F7.7b | ||||||
Corresponding_transcript | F09F7.7a.1 | |||||
F09F7.7b.1 | ||||||
Other_sequence (42) | ||||||
Associated_feature | WBsf651053 | |||||
WBsf651054 | ||||||
WBsf981481 | ||||||
WBsf226695 | ||||||
Experimental_info | RNAi_result | WBRNAi00000792 | Inferred_automatically | RNAi_primary | ||
WBRNAi00005260 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00111927 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00082381 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00030723 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00013003 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00044164 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr5704 | |||||
Expr10729 | ||||||
Expr1018326 | ||||||
Expr1037438 | ||||||
Expr1148126 | ||||||
Expr2002356 | ||||||
Expr2020574 | ||||||
Drives_construct | WBCnstr00004168 | |||||
WBCnstr00027406 | ||||||
Construct_product | WBCnstr00027406 | |||||
Regulate_expr_cluster | WBPaper00056997:nmad-1(ok3133)_downregulated_germline_20C | |||||
WBPaper00056997:nmad-1(ok3133)_downregulated_germline_25C | ||||||
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_20C | ||||||
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C | ||||||
WBPaper00056997:NMAD-1_interacting | ||||||
Microarray_results (26) | ||||||
Expression_cluster (187) | ||||||
Interaction (284) | ||||||
Map_info (3) | ||||||
Reference | WBPaper00038491 | |||||
WBPaper00046746 | ||||||
WBPaper00055090 | ||||||
WBPaper00056997 | ||||||
WBPaper00064973 | ||||||
WBPaper00065308 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |