WormBase Tree Display for Gene: WBGene00017274
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| WBGene00017274 | SMap | S_parent | Sequence | F08F8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F08F8.9 | |||||||
| Molecular_name | F08F8.9a | ||||||||
| F08F8.9a.1 | |||||||||
| CE27936 | |||||||||
| F08F8.9b | |||||||||
| CE27937 | |||||||||
| F08F8.9c | |||||||||
| CE30651 | |||||||||
| F08F8.9b.1 | |||||||||
| F08F8.9c.1 | |||||||||
| Other_name | CELE_F08F8.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | F08F8.9 | ||||||||
| DB_info | Database | AceView | gene | 3I440 | |||||
| WormQTL | gene | WBGene00017274 | |||||||
| WormFlux | gene | WBGene00017274 | |||||||
| NDB | locus_tag | CELE_F08F8.9 | |||||||
| NCBI | gene | 176045 | |||||||
| RefSeq | protein | NM_066222.8 | |||||||
| NM_066221.7 | |||||||||
| NM_001382914.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF350125 | |||||||
| TrEMBL | UniProtAcc | H2KZP2 | |||||||
| H2KZP3 | |||||||||
| Q95ZV9 | |||||||||
| UniProt_GCRP | UniProtAcc | Q95ZV9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (47) | |||||||||
| Strain | WBStrain00002235 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00090282 | ||||||||
| Contained_in_operon | CEOP3428 | ||||||||
| Ortholog | WBGene00149910 | Caenorhabditis brenneri | From_analysis | OMA | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00081194 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00087517 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| CSP26.g11503 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
| CSP40.g1334 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Cnig_chr_III.g11841 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold505.g2406 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_02320.g25962 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| GCK72_008703 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| Sp34_30035900 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00017275 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in body wall muscle cell and germ line based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; hsf-1; and aak-2 based on microarray; RNA-seq; and proteomic studies. Is affected by six chemicals including D-glucose; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F08F8.9a | |||||||
| F08F8.9b | |||||||||
| F08F8.9c | |||||||||
| Corresponding_transcript | F08F8.9a.1 | ||||||||
| F08F8.9b.1 | |||||||||
| F08F8.9c.1 | |||||||||
| Other_sequence | CBC02530_1 | ||||||||
| CBC08893_1 | |||||||||
| Associated_feature | WBsf651200 | ||||||||
| WBsf667066 | |||||||||
| WBsf667067 | |||||||||
| WBsf992994 | |||||||||
| WBsf1015226 | |||||||||
| WBsf226964 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00110492 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00110511 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044034 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110524 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram2062 | ||||||||
| Expr5687 | |||||||||
| Expr5688 | |||||||||
| Expr1024240 | |||||||||
| Expr1037421 | |||||||||
| Expr1148000 | |||||||||
| Expr2002303 | |||||||||
| Expr2020522 | |||||||||
| Drives_construct | WBCnstr00002966 | ||||||||
| WBCnstr00004477 | |||||||||
| WBCnstr00027434 | |||||||||
| Construct_product | WBCnstr00027434 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (74) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Positive | Positive_clone | F08F8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.749144 | |||||||
| Reference | WBPaper00028478 | ||||||||
| Method | Gene |
