WormBase Tree Display for Gene: WBGene00017254

WBGene00017254 SMap: S_parent: Sequence: F08D12
  Identity: Version: 2
    Name: CGC_name: fbxb-111 Person_evidence: WBPerson655
      Sequence_name: F08D12.11
      Molecular_name: F08D12.11
        F08D12.11.1
        CE09244
      Other_name: CELE_F08D12.11 Accession_evidence: NDB BX284602
      Public_name: fbxb-111
    DB_info: Database: AceView gene 2D64
        WormQTL gene WBGene00017254
        WormFlux gene WBGene00017254
        NDB locus_tag CELE_F08D12.11
        Panther gene CAEEL|WormBase=WBGene00017254|UniProtKB=P91234
          family PTHR22899
        NCBI gene 173623
        RefSeq protein NM_061959.7
        TREEFAM TREEFAM_ID TF322269
        TrEMBL UniProtAcc P91234
        UniProt_GCRP UniProtAcc P91234
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-111
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (23)
    RNASeq_FPKM (74)
    Ortholog (20)
    Paralog (143)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABalaaaala; ABalaaaarl; ABalaaaarr; ciliated neurons; and excretory gland cell based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and tph-1 based on tiling array; microarray; and RNA-seq studies. Is affected by eleven chemicals including methylmercuric chloride; multi-walled carbon nanotube; and Alovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F08D12.11
    Corresponding_transcript: F08D12.11.1
    Associated_feature: WBsf649944
      WBsf987052
      WBsf987053
      WBsf1011769
      WBsf222801
  Experimental_info: RNAi_result: WBRNAi00043987 Inferred_automatically: RNAi_primary
      WBRNAi00030643 Inferred_automatically: RNAi_primary
      WBRNAi00012876 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025125
      Expr1037411
      Expr1147960
      Expr2011605
      Expr2029844
    Drives_construct: WBCnstr00027451
    Construct_product: WBCnstr00027451
    Microarray_results (15)
    Expression_cluster (86)
    Interaction: WBInteraction000260068
      WBInteraction000373991
      WBInteraction000418439
  Map_info: Map: II Position: -11.2236 Error: 0.148937
    Positive: Positive_clone: F08D12 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene