WormBase Tree Display for Gene: WBGene00017164
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| WBGene00017164 | SMap | S_parent | Sequence | F01F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | eng-1 | Paper_evidence | WBPaper00030731 | |||||
| Sequence_name | F01F1.10 | ||||||||
| Molecular_name | F01F1.10a | ||||||||
| F01F1.10a.1 | |||||||||
| CE33045 | |||||||||
| F01F1.10b | |||||||||
| CE32851 | |||||||||
| F01F1.10c | |||||||||
| CE01223 | |||||||||
| F01F1.10b.1 | |||||||||
| F01F1.10c.1 | |||||||||
| Other_name | CELE_F01F1.10 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | eng-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 03 Jul 2007 14:08:44 | WBPerson2970 | Name_change | CGC_name | eng-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | eng | ||||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00063437 | ||||||||
| 00063438 | |||||||||
| 00063439 | |||||||||
| 00063440 | |||||||||
| 00063441 | |||||||||
| 00063442 | |||||||||
| 00122618 | |||||||||
| 00122619 | |||||||||
| Contained_in_operon | CEOP3344 | ||||||||
| Ortholog (35) | |||||||||
| Structured_description | Concise_description | F01F1.10 encodes two isoforms of an endo-beta-N-acetylglucosaminidase (ENGase, or Endo-M); recombinant F01F1.10 has ENGase activity when expressed in E. coli, with specificity mainly for high-mannose type oligosaccharides, and optimal activity on Man8GlcNAc2; F01F1.10 has no obvious phenotype in mass RNAi screens; F01F1.10 is predicted to catabolize free oligosaccharides in the cytosol. | Paper_evidence | WBPaper00004403 | |||||
| WBPaper00005531 | |||||||||
| WBPaper00005654 | |||||||||
| WBPaper00013099 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable hydrolase activity, hydrolyzing O-glycosyl compounds. Predicted to be located in cytosol. Expressed in pharyngeal cell. Is an ortholog of human ENGASE (endo-beta-N-acetylglucosaminidase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F01F1.10a | |||||||
| F01F1.10b | |||||||||
| F01F1.10c | |||||||||
| Corresponding_CDS_history | F01F1.10:wp91 | ||||||||
| Corresponding_transcript | F01F1.10a.1 | ||||||||
| F01F1.10b.1 | |||||||||
| F01F1.10c.1 | |||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf226732 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00005330 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043740 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043741 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030537 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012735 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr121 | ||||||||
| Expr1018627 | |||||||||
| Expr1037378 | |||||||||
| Expr1147726 | |||||||||
| Expr2011318 | |||||||||
| Expr2029554 | |||||||||
| Drives_construct | WBCnstr00027518 | ||||||||
| Construct_product | WBCnstr00027518 | ||||||||
| Antibody | WBAntibody00001258 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (89) | |||||||||
| Interaction | WBInteraction000183877 | ||||||||
| WBInteraction000265135 | |||||||||
| WBInteraction000275822 | |||||||||
| WBInteraction000309475 | |||||||||
| WBInteraction000326179 | |||||||||
| WBInteraction000435197 | |||||||||
| WBInteraction000439265 | |||||||||
| WBInteraction000445996 | |||||||||
| WBInteraction000447110 | |||||||||
| WBInteraction000455314 | |||||||||
| Map_info | Map | III | Position | -1.43812 | Error | 5.4e-05 | |||
| Positive | Positive_clone | F01F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029024 | ||||||||
| WBPaper00030731 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
