WormBase Tree Display for Gene: WBGene00017142
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| WBGene00017142 | SMap | S_parent | Sequence | EEED8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | EEED8.14 | |||||||
| Molecular_name | EEED8.14 | ||||||||
| EEED8.14.1 | |||||||||
| CE43657 | |||||||||
| Other_name | CELE_EEED8.14 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | EEED8.14 | ||||||||
| DB_info | Database | AceView | gene | 2F704 | |||||
| WormQTL | gene | WBGene00017142 | |||||||
| WormFlux | gene | WBGene00017142 | |||||||
| NDB | locus_tag | CELE_EEED8.14 | |||||||
| NCBI | gene | 184046 | |||||||
| RefSeq | protein | NM_062623.4 | |||||||
| TrEMBL | UniProtAcc | Q19069 | |||||||
| UniProt_GCRP | UniProtAcc | Q19069 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP2180 | ||||||||
| Ortholog | WBGene00057371 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||
| WormBase-Compara | |||||||||
| WBGene00150355 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
| WBGene00153636 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
| WBGene00087059 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||||
| CSP40.g7157 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Cni-EEED8.14 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold629.g11408 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| FL83_06047 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| GCK72_006019 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| chrII_pilon.g4490 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarppaapp; ABarpppapp; ALN; germ line; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; glp-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twelve chemicals including rotenone; manganese chloride; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Calycin. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | EEED8.14 | |||||||
| Corresponding_CDS_history | EEED8.14:wp201 | ||||||||
| Corresponding_transcript | EEED8.14.1 | ||||||||
| Other_sequence | CBC07301_1 | ||||||||
| Associated_feature | WBsf223051 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00007964 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043695 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012701 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082451 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082596 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026283 | ||||||||
| Expr1037366 | |||||||||
| Expr1147678 | |||||||||
| Expr2002166 | |||||||||
| Expr2020387 | |||||||||
| Microarray_results | SMD_EEED8.14 | ||||||||
| 186363_at | |||||||||
| Aff_EEED8.14 | |||||||||
| GPL14144_EEED8.14_958-1017_0.962_1_A | |||||||||
| GPL19516_CGZ0014232 | |||||||||
| GPL21109_EEED8.14 | |||||||||
| GPL3518_CE02589 | |||||||||
| GPL8304_CE_WBGene00017142_C | |||||||||
| GPL8673_EEED8_14P00190 | |||||||||
| GPL8673_EEED8_14P00692 | |||||||||
| Expression_cluster (124) | |||||||||
| Interaction (103) | |||||||||
| Map_info | Positive | Positive_clone | EEED8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -1.67392 | |||||||
| Method | Gene |
