WormBase Tree Display for Gene: WBGene00017120
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WBGene00017120 | SMap | S_parent | Sequence | E04A4 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | tctn-1 | Person_evidence | WBPerson1657 | |||
WBPerson14462 | |||||||
WBPerson14460 | |||||||
Sequence_name | E04A4.6 | ||||||
Molecular_name | E04A4.6 | ||||||
E04A4.6.1 | |||||||
CE46218 | |||||||
Other_name | CELE_E04A4.6 | Accession_evidence | NDB | BX284604 | |||
Public_name | tctn-1 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tctn | ||||||
Allele (18) | |||||||
Strain | WBStrain00032915 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00032516 | ||||||
00032517 | |||||||
00032518 | |||||||
00032519 | |||||||
Contained_in_operon | CEOP4148 | ||||||
Ortholog (24) | |||||||
Structured_description | Automated_description | Predicted to be involved in cilium assembly. Predicted to be located in ciliary transition zone. Human ortholog(s) of this gene implicated in Joubert syndrome 13; Joubert syndrome 18; and orofaciodigital syndrome IV. Is an ortholog of human TCTN1 (tectonic family member 1) and TCTN3 (tectonic family member 3). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0110987 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24519) | ||
DOID:0110982 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:26113) | ||||
DOID:0060374 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24519) | ||||
Molecular_info | Corresponding_CDS | E04A4.6 | |||||
Corresponding_CDS_history | E04A4.6:wp227 | ||||||
Corresponding_transcript | E04A4.6.1 | ||||||
Other_sequence | ACC09020_1 | ||||||
EY461619.1 | |||||||
Associated_feature | WBsf651774 | ||||||
WBsf667904 | |||||||
Experimental_info | RNAi_result | WBRNAi00012682 | Inferred_automatically | RNAi_primary | |||
WBRNAi00043666 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr12582 | ||||||
Expr1013020 | |||||||
Expr1037353 | |||||||
Expr1147650 | |||||||
Expr2017365 | |||||||
Expr2035502 | |||||||
Construct_product | WBCnstr00022310 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (130) | |||||||
Interaction | WBInteraction000317863 | ||||||
WBInteraction000390963 | |||||||
Map_info | Map | IV | Position | 0.770768 | |||
Positive | Positive_clone | E04A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00048761 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |